RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	PRPF40B	Q6NWY9	871 aa	Known RBP	33.85	■■■■□ 3.01
STK40-208	ENST00000482458	RSPH6A	Q9H0K4	717 aa		33.85	■■■■□ 3.01
STK40-208	ENST00000482458	PIP4K2A	P48426	406 aa	Predicted RBP	33.84	■■■■□ 3.01
STK40-208	ENST00000482458	CFAP53	Q96M91	514 aa		33.84	■■■■□ 3.01
STK40-208	ENST00000482458	USP16	Q9Y5T5	823 aa		33.84	■■■■□ 3.01
STK40-208	ENST00000482458	MASTL	Q96GX5	879 aa		33.83	■■■■□ 3.01
STK40-208	ENST00000482458	TNS4	Q8IZW8	715 aa		33.82	■■■■□ 3
STK40-208	ENST00000482458	DICER1	Q9UPY3	1922 aa	Known RBP	33.81	■■■■□ 3
STK40-208	ENST00000482458	HSPA1A	P0DMV8	641 aa	Known RBP	33.81	■■■■□ 3
STK40-208	ENST00000482458	HSPA1B	P0DMV9	641 aa	Known RBP	33.81	■■■■□ 3
STK40-208	ENST00000482458	SOGA3	Q5TF21	947 aa		33.81	■■■■□ 3
STK40-208	ENST00000482458	SLX4	Q8IY92	1834 aa		33.81	■■■■□ 3
STK40-208	ENST00000482458	BCOR	Q6W2J9	1755 aa		33.8	■■■■□ 3
STK40-208	ENST00000482458	PRAMEF22	A3QJZ6	481 aa		33.8	■■■■□ 3
STK40-208	ENST00000482458	DDN	O94850	711 aa	Predicted RBP	33.8	■■■■□ 3
STK40-208	ENST00000482458	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.79	■■■■□ 3
STK40-208	ENST00000482458	CHADL	Q6NUI6	762 aa		33.78	■■■■□ 3
STK40-208	ENST00000482458	CLEC4G	Q6UXB4	293 aa		33.78	■■■■□ 3
STK40-208	ENST00000482458	NUDC	Q9Y266	331 aa		33.78	■■■■□ 3
STK40-208	ENST00000482458	CAPN15	O75808	1086 aa		33.77	■■■■□ 3
STK40-208	ENST00000482458	SNRPA1	P09661	255 aa	Known RBP	33.77	■■■■□ 3
STK40-208	ENST00000482458	RTF1	Q92541	710 aa	Known RBP	33.77	■■■■□ 3
STK40-208	ENST00000482458	ZNF652	Q9Y2D9	606 aa		33.77	■■■■□ 3
STK40-208	ENST00000482458	MCM10	Q7L590	875 aa		33.76	■■■□□ 2.99
STK40-208	ENST00000482458	CACNA1S	Q13698	1873 aa		33.74	■■■□□ 2.99
STK40-208	ENST00000482458	POTEI	P0CG38	1075 aa		33.74	■■■□□ 2.99
STK40-208	ENST00000482458	POTEJ	P0CG39	1038 aa		33.74	■■■□□ 2.99
STK40-208	ENST00000482458	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.74	■■■□□ 2.99
STK40-208	ENST00000482458	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.74	■■■□□ 2.99
STK40-208	ENST00000482458	ARFGEF2	Q9Y6D5	1785 aa		33.73	■■■□□ 2.99
STK40-208	ENST00000482458	CCDC93	Q567U6	631 aa		33.73	■■■□□ 2.99
STK40-208	ENST00000482458	C7orf43	Q8WVR3	580 aa		33.73	■■■□□ 2.99
STK40-208	ENST00000482458	NPR1	P16066	1061 aa		33.72	■■■□□ 2.99
STK40-208	ENST00000482458	CREBZF	Q9NS37	354 aa		33.72	■■■□□ 2.99
STK40-208	ENST00000482458	NBPF26	B4DH59	902 aa		33.7	■■■□□ 2.99
STK40-208	ENST00000482458	NBPF10	Q6P3W6	841 aa	Known RBP	33.7	■■■□□ 2.99
STK40-208	ENST00000482458	NBPF15	Q8N660	670 aa		33.7	■■■□□ 2.99
STK40-208	ENST00000482458	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.7	■■■□□ 2.99
STK40-208	ENST00000482458	IQCA1L	A6NCM1	817 aa		33.69	■■■□□ 2.98
STK40-208	ENST00000482458	DCTN1	Q14203	1278 aa		33.69	■■■□□ 2.98
STK40-208	ENST00000482458	TPTE2	Q6XPS3	522 aa		33.69	■■■□□ 2.98
STK40-208	ENST00000482458	MKRN1	Q9UHC7	482 aa	Known RBP	33.69	■■■□□ 2.98
STK40-208	ENST00000482458	KLRG2	A4D1S0	409 aa	Predicted RBP	33.67	■■■□□ 2.98
STK40-208	ENST00000482458	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.67	■■■□□ 2.98
STK40-208	ENST00000482458	FAM177B	A6PVY3	158 aa		33.66	■■■□□ 2.98
STK40-208	ENST00000482458	RGL2	O15211	777 aa		33.66	■■■□□ 2.98
STK40-208	ENST00000482458	PPP2R1A	P30153	589 aa		33.66	■■■□□ 2.98
STK40-208	ENST00000482458	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.66	■■■□□ 2.98
STK40-208	ENST00000482458	LDHD	Q86WU2	507 aa		33.65	■■■□□ 2.98
STK40-208	ENST00000482458	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.65	■■■□□ 2.98
STK40-208	ENST00000482458	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.65	■■■□□ 2.98
STK40-208	ENST00000482458	HTATSF1	O43719	755 aa	Known RBP	33.64	■■■□□ 2.98
STK40-208	ENST00000482458	OLFM4	Q6UX06	510 aa		33.63	■■■□□ 2.97
STK40-208	ENST00000482458	ZNF541	Q9H0D2	1346 aa		33.62	■■■□□ 2.97
STK40-208	ENST00000482458	TAF7	Q15545	349 aa	Predicted RBP	33.61	■■■□□ 2.97
STK40-208	ENST00000482458	HLF	Q16534	295 aa		33.61	■■■□□ 2.97
STK40-208	ENST00000482458	RTKN2	Q8IZC4	609 aa		33.61	■■■□□ 2.97
STK40-208	ENST00000482458	PASK	Q96RG2	1323 aa		33.6	■■■□□ 2.97
STK40-208	ENST00000482458	GTF2E1	P29083	439 aa	Predicted RBP	33.59	■■■□□ 2.97
STK40-208	ENST00000482458	MIS18A	Q9NYP9	233 aa		33.59	■■■□□ 2.97
STK40-208	ENST00000482458	CNTNAP1	P78357	1384 aa		33.59	■■■□□ 2.97
STK40-208	ENST00000482458	SCN4A	P35499	1836 aa		33.58	■■■□□ 2.97
STK40-208	ENST00000482458	EAPP	Q56P03	285 aa	Predicted RBP	33.58	■■■□□ 2.97
STK40-208	ENST00000482458	ALDH1B1	P30837	517 aa		33.57	■■■□□ 2.96
STK40-208	ENST00000482458	HACL1	Q9UJ83	578 aa		33.57	■■■□□ 2.96
STK40-208	ENST00000482458	IARS	P41252	1262 aa	Known RBP	33.55	■■■□□ 2.96
STK40-208	ENST00000482458	SYNE4	Q8N205	404 aa		33.55	■■■□□ 2.96
STK40-208	ENST00000482458	NGEF	Q8N5V2	710 aa		33.55	■■■□□ 2.96
STK40-208	ENST00000482458	CLEC11A	Q9Y240	323 aa		33.54	■■■□□ 2.96
STK40-208	ENST00000482458	ITGBL1	O95965	494 aa	Predicted RBP	33.53	■■■□□ 2.96
STK40-208	ENST00000482458	EPHX2	P34913	555 aa		33.53	■■■□□ 2.96
STK40-208	ENST00000482458	ABCC12	Q96J65	1359 aa		33.52	■■■□□ 2.96
STK40-208	ENST00000482458	TMEM88B	A6NKF7	163 aa		33.52	■■■□□ 2.96
STK40-208	ENST00000482458	NYX	Q9GZU5	481 aa		33.52	■■■□□ 2.96
STK40-208	ENST00000482458	FZD9	O00144	591 aa		33.51	■■■□□ 2.95
STK40-208	ENST00000482458	NUTM1	Q86Y26	1132 aa		33.51	■■■□□ 2.95
STK40-208	ENST00000482458	LAMB4	A4D0S4	1761 aa		33.51	■■■□□ 2.95
STK40-208	ENST00000482458	RNF123	Q5XPI4	1314 aa		33.51	■■■□□ 2.95
STK40-208	ENST00000482458	ERVV-1	B6SEH8	477 aa		33.5	■■■□□ 2.95
STK40-208	ENST00000482458	FOXN1	O15353	648 aa		33.5	■■■□□ 2.95
STK40-208	ENST00000482458	CRY2	Q49AN0	593 aa		33.5	■■■□□ 2.95
STK40-208	ENST00000482458	PNISR	Q8TF01	805 aa	Known RBP	33.5	■■■□□ 2.95
STK40-208	ENST00000482458	PNMA8A	Q86V59	439 aa	Predicted RBP	33.49	■■■□□ 2.95
STK40-208	ENST00000482458	MAP3K15	Q6ZN16	1313 aa		33.49	■■■□□ 2.95
STK40-208	ENST00000482458	NEFM	P07197	916 aa		33.48	■■■□□ 2.95
STK40-208	ENST00000482458	VEGFB	P49765	207 aa		33.48	■■■□□ 2.95
STK40-208	ENST00000482458	PSMD1	Q99460	953 aa		33.48	■■■□□ 2.95
STK40-208	ENST00000482458	RRP7A	Q9Y3A4	280 aa	Known RBP	33.48	■■■□□ 2.95
STK40-208	ENST00000482458	SNED1	Q8TER0	1413 aa		33.47	■■■□□ 2.95
STK40-208	ENST00000482458	KIF6	Q6ZMV9	814 aa		33.47	■■■□□ 2.95
STK40-208	ENST00000482458	GPC2	Q8N158	579 aa		33.47	■■■□□ 2.95
STK40-208	ENST00000482458	JDP2	Q8WYK2	163 aa		33.47	■■■□□ 2.95
STK40-208	ENST00000482458	TTLL7	Q6ZT98	887 aa		33.46	■■■□□ 2.95
STK40-208	ENST00000482458	ADAMTSL1	Q8N6G6	1762 aa		33.45	■■■□□ 2.95
STK40-208	ENST00000482458	MAP1S	Q66K74	1059 aa	Predicted RBP	33.45	■■■□□ 2.95
STK40-208	ENST00000482458	CC2D2B	Q6DHV5	1058 aa		33.45	■■■□□ 2.95
STK40-208	ENST00000482458	RPGR	Q92834	1020 aa	Known RBP	33.45	■■■□□ 2.95
STK40-208	ENST00000482458	MYL6B	P14649	208 aa		33.44	■■■□□ 2.94
STK40-208	ENST00000482458	GPT	P24298	496 aa		33.44	■■■□□ 2.94
STK40-208	ENST00000482458	EIF4A1	P60842	406 aa	Known RBP	33.44	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms