RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 SRGNP10124 158 aa18.49■□□□□ 0.55
CAPN8-209ENST00000482401 PHACTR3Q96KR7 559 aa18.49■□□□□ 0.55
CAPN8-209ENST00000482401 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
CAPN8-209ENST00000482401 RGL2O15211 777 aa18.48■□□□□ 0.55
CAPN8-209ENST00000482401 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
CAPN8-209ENST00000482401 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
CAPN8-209ENST00000482401 CCDC24Q8N4L8 307 aa18.48■□□□□ 0.55
CAPN8-209ENST00000482401 USP16Q9Y5T5 823 aa18.48■□□□□ 0.55
CAPN8-209ENST00000482401 POTECB2RU33 542 aa18.47■□□□□ 0.55
CAPN8-209ENST00000482401 HTATSF1O43719 755 aaKnown RBP18.47■□□□□ 0.55
CAPN8-209ENST00000482401 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
CAPN8-209ENST00000482401 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
CAPN8-209ENST00000482401 KCNQ3O43525 872 aa18.46■□□□□ 0.55
CAPN8-209ENST00000482401 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
CAPN8-209ENST00000482401 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
CAPN8-209ENST00000482401 TPTE2Q6XPS3 522 aa18.46■□□□□ 0.55
CAPN8-209ENST00000482401 DICER1Q9UPY3 1922 aaKnown RBP18.45■□□□□ 0.54
CAPN8-209ENST00000482401 NPR1P16066 1061 aa18.45■□□□□ 0.54
CAPN8-209ENST00000482401 COL13A1Q5TAT6 717 aaPredicted RBP18.45■□□□□ 0.54
CAPN8-209ENST00000482401 IQCA1LA6NCM1 817 aa18.44■□□□□ 0.54
CAPN8-209ENST00000482401 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
CAPN8-209ENST00000482401 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
CAPN8-209ENST00000482401 CCDC93Q567U6 631 aa18.43■□□□□ 0.54
CAPN8-209ENST00000482401 MCM10Q7L590 875 aa18.43■□□□□ 0.54
CAPN8-209ENST00000482401 DDNO94850 711 aaPredicted RBP18.42■□□□□ 0.54
CAPN8-209ENST00000482401 NEFMP07197 916 aa18.42■□□□□ 0.54
CAPN8-209ENST00000482401 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
CAPN8-209ENST00000482401 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
CAPN8-209ENST00000482401 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN8-209ENST00000482401 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
CAPN8-209ENST00000482401 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-209ENST00000482401 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-209ENST00000482401 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-209ENST00000482401 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
CAPN8-209ENST00000482401 SLX4Q8IY92 1834 aa18.41■□□□□ 0.54
CAPN8-209ENST00000482401 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
CAPN8-209ENST00000482401 HSPA1AP0DMV8 641 aaKnown RBP18.4■□□□□ 0.54
CAPN8-209ENST00000482401 HSPA1BP0DMV9 641 aaKnown RBP18.4■□□□□ 0.54
CAPN8-209ENST00000482401 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
CAPN8-209ENST00000482401 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
CAPN8-209ENST00000482401 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
CAPN8-209ENST00000482401 FKBP4Q02790 459 aaKnown RBP eCLIP18.4■□□□□ 0.54
CAPN8-209ENST00000482401 C7orf43Q8WVR3 580 aa18.4■□□□□ 0.54
CAPN8-209ENST00000482401 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
CAPN8-209ENST00000482401 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
CAPN8-209ENST00000482401 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
CAPN8-209ENST00000482401 L3MBTL3Q96JM7 780 aaPredicted RBP18.39■□□□□ 0.53
CAPN8-209ENST00000482401 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
CAPN8-209ENST00000482401 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
CAPN8-209ENST00000482401 DCTN1Q14203 1278 aa18.37■□□□□ 0.53
CAPN8-209ENST00000482401 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
CAPN8-209ENST00000482401 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
CAPN8-209ENST00000482401 CACNA1SQ13698 1873 aa18.36■□□□□ 0.53
CAPN8-209ENST00000482401 TAF1DQ9H5J8 278 aaPredicted RBP18.36■□□□□ 0.53
CAPN8-209ENST00000482401 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
CAPN8-209ENST00000482401 ERVV-1B6SEH8 477 aa18.35■□□□□ 0.53
CAPN8-209ENST00000482401 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
CAPN8-209ENST00000482401 SCN4AP35499 1836 aa18.35■□□□□ 0.53
CAPN8-209ENST00000482401 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
CAPN8-209ENST00000482401 CC2D2BQ6DHV5 1058 aa18.34■□□□□ 0.53
CAPN8-209ENST00000482401 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
CAPN8-209ENST00000482401 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
CAPN8-209ENST00000482401 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
CAPN8-209ENST00000482401 CAPN15O75808 1086 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 POTEIP0CG38 1075 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 IARSP41252 1262 aaKnown RBP18.33■□□□□ 0.52
CAPN8-209ENST00000482401 HLFQ16534 295 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 PNMA8AQ86V59 439 aaPredicted RBP18.33■□□□□ 0.52
CAPN8-209ENST00000482401 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
CAPN8-209ENST00000482401 PASKQ96RG2 1323 aa18.32■□□□□ 0.52
CAPN8-209ENST00000482401 EAPPQ56P03 285 aaPredicted RBP18.32■□□□□ 0.52
CAPN8-209ENST00000482401 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
CAPN8-209ENST00000482401 PSMD1Q99460 953 aa18.32■□□□□ 0.52
CAPN8-209ENST00000482401 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
CAPN8-209ENST00000482401 CNTNAP1P78357 1384 aa18.31■□□□□ 0.52
CAPN8-209ENST00000482401 TMEM88BA6NKF7 163 aa18.31■□□□□ 0.52
CAPN8-209ENST00000482401 FZD9O00144 591 aa18.31■□□□□ 0.52
CAPN8-209ENST00000482401 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
CAPN8-209ENST00000482401 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
CAPN8-209ENST00000482401 EPHX2P34913 555 aa18.3■□□□□ 0.52
CAPN8-209ENST00000482401 CRY2Q49AN0 593 aa18.3■□□□□ 0.52
CAPN8-209ENST00000482401 GPC2Q8N158 579 aa18.3■□□□□ 0.52
CAPN8-209ENST00000482401 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
CAPN8-209ENST00000482401 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
CAPN8-209ENST00000482401 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
CAPN8-209ENST00000482401 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
CAPN8-209ENST00000482401 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
CAPN8-209ENST00000482401 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
CAPN8-209ENST00000482401 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
CAPN8-209ENST00000482401 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
CAPN8-209ENST00000482401 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
CAPN8-209ENST00000482401 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
CAPN8-209ENST00000482401 TMX4Q9H1E5 349 aaPredicted RBP18.28■□□□□ 0.52
CAPN8-209ENST00000482401 IBTKQ9P2D0 1353 aaPredicted RBP18.28■□□□□ 0.52
CAPN8-209ENST00000482401 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.52
CAPN8-209ENST00000482401 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
CAPN8-209ENST00000482401 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms