RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 SIAH2O43255 324 aa13.02□□□□□ -0.33
LIMK2-209ENST00000482270 SMPD1P17405 629 aa13.02□□□□□ -0.33
LIMK2-209ENST00000482270 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
LIMK2-209ENST00000482270 YTHDC2Q9H6S0 1430 aaKnown RBP13.02□□□□□ -0.33
LIMK2-209ENST00000482270 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
LIMK2-209ENST00000482270 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
LIMK2-209ENST00000482270 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
LIMK2-209ENST00000482270 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
LIMK2-209ENST00000482270 TECPR2O15040 1411 aa13.01□□□□□ -0.33
LIMK2-209ENST00000482270 ZBTB33Q86T24 672 aa13□□□□□ -0.33
LIMK2-209ENST00000482270 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
LIMK2-209ENST00000482270 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
LIMK2-209ENST00000482270 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
LIMK2-209ENST00000482270 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
LIMK2-209ENST00000482270 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 ST8SIA5O15466 376 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 DGAT1O75907 488 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 PTK2Q05397 1052 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 HPS1Q92902 700 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
LIMK2-209ENST00000482270 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 NDUFB9Q9Y6M9 179 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
LIMK2-209ENST00000482270 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
LIMK2-209ENST00000482270 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
LIMK2-209ENST00000482270 LCE2BO14633 110 aa12.97□□□□□ -0.33
LIMK2-209ENST00000482270 SAFB2Q14151 953 aaKnown RBP eCLIP12.97□□□□□ -0.33
LIMK2-209ENST00000482270 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
LIMK2-209ENST00000482270 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
LIMK2-209ENST00000482270 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
LIMK2-209ENST00000482270 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
LIMK2-209ENST00000482270 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
LIMK2-209ENST00000482270 MCM6Q14566 821 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.33
LIMK2-209ENST00000482270 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
LIMK2-209ENST00000482270 APBB1O00213 710 aa12.95□□□□□ -0.34
LIMK2-209ENST00000482270 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
LIMK2-209ENST00000482270 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
LIMK2-209ENST00000482270 SLC10A4Q96EP9 437 aa12.95□□□□□ -0.34
LIMK2-209ENST00000482270 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
LIMK2-209ENST00000482270 DLC1Q96QB1 1528 aa12.94□□□□□ -0.34
LIMK2-209ENST00000482270 PXDNQ92626 1479 aa12.94□□□□□ -0.34
LIMK2-209ENST00000482270 FSHRP23945 695 aa12.94□□□□□ -0.34
LIMK2-209ENST00000482270 MYT1Q01538 1121 aa12.94□□□□□ -0.34
LIMK2-209ENST00000482270 VASH1Q7L8A9 365 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-209ENST00000482270 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
LIMK2-209ENST00000482270 NNTQ13423 1086 aa12.93□□□□□ -0.34
LIMK2-209ENST00000482270 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
LIMK2-209ENST00000482270 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
LIMK2-209ENST00000482270 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
LIMK2-209ENST00000482270 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
LIMK2-209ENST00000482270 FBXO45P0C2W1 286 aa12.92□□□□□ -0.34
LIMK2-209ENST00000482270 RAB15P59190 212 aa12.92□□□□□ -0.34
LIMK2-209ENST00000482270 TRAK1Q9UPV9 953 aa12.92□□□□□ -0.34
LIMK2-209ENST00000482270 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 FOXO3O43524 673 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 ADH1CP00326 375 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 ABL2P42684 1182 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 POGKQ9P215 609 aa12.91□□□□□ -0.34
LIMK2-209ENST00000482270 AFF2P51816 1311 aa12.9□□□□□ -0.34
LIMK2-209ENST00000482270 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
LIMK2-209ENST00000482270 GPR37L1O60883 481 aa12.9□□□□□ -0.34
LIMK2-209ENST00000482270 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-209ENST00000482270 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
LIMK2-209ENST00000482270 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
LIMK2-209ENST00000482270 AXIN1O15169 862 aa12.89□□□□□ -0.35
LIMK2-209ENST00000482270 ZNF772Q68DY9 489 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-209ENST00000482270 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
LIMK2-209ENST00000482270 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
LIMK2-209ENST00000482270 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 NR3C2P08235 984 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
LIMK2-209ENST00000482270 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
LIMK2-209ENST00000482270 CDK15Q96Q40 435 aa12.87□□□□□ -0.35
LIMK2-209ENST00000482270 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-209ENST00000482270 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
LIMK2-209ENST00000482270 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
LIMK2-209ENST00000482270 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
LIMK2-209ENST00000482270 AVPP01185 164 aa12.85□□□□□ -0.35
LIMK2-209ENST00000482270 GRM5P41594 1212 aa12.85□□□□□ -0.35
LIMK2-209ENST00000482270 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
LIMK2-209ENST00000482270 NGLY1Q96IV0 654 aa12.85□□□□□ -0.35
LIMK2-209ENST00000482270 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-209ENST00000482270 QRICH2Q9H0J4 1663 aa12.85□□□□□ -0.35
LIMK2-209ENST00000482270 PLCH1Q4KWH8 1693 aa12.84□□□□□ -0.35
LIMK2-209ENST00000482270 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
LIMK2-209ENST00000482270 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
LIMK2-209ENST00000482270 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
LIMK2-209ENST00000482270 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
LIMK2-209ENST00000482270 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
LIMK2-209ENST00000482270 ANKARQ7Z5J8 1434 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms