RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 CEP135Q66GS9 1140 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 ELP1O95163 1332 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 FLIIQ13045 1269 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 ME3Q16798 604 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 TNMDQ9H2S6 317 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 ZNF215Q9UL58 517 aaPredicted RBP18.46■□□□□ 0.55
CNKSR1-207ENST00000482227 USP27XA6NNY8 438 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 KRT85P78386 507 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 ZNF397Q8NF99 534 aaPredicted RBP18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 FOXO3O43524 673 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 IRX5P78411 483 aaPredicted RBP18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 FERMT3Q86UX7 667 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 ZNF592Q92610 1267 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 CLIP2Q9UDT6 1046 aa18.45■□□□□ 0.54
CNKSR1-207ENST00000482227 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 JAKMIP1Q96N16 626 aaKnown RBP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 V9GYY5 206 aaPredicted RBP18.44■□□□□ 0.54
CNKSR1-207ENST00000482227 KCNJ4P48050 445 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 PTH1RQ03431 593 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 WASLO00401 505 aaPredicted RBP18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 ARID5BQ14865 1188 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 FBXO38Q6PIJ6 1188 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 NYAP1Q6ZVC0 841 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 ERBB3P21860 1342 aa18.43■□□□□ 0.54
CNKSR1-207ENST00000482227 DLC1Q96QB1 1528 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 ZNF165P49910 485 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 LARP1BQ659C4 914 aaKnown RBP18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 LRRC8AQ8IWT6 810 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 CLSTN2Q9H4D0 955 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 ST7Q9NRC1 585 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
CNKSR1-207ENST00000482227 SURF6O75683 361 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 DDX54Q8TDD1 881 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 TM6SF1Q9BZW5 370 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 CCDC66A2RUB6 948 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 VGLL3A8MV65 326 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 CDC25BP30305 580 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 COL9A3Q14050 684 aaPredicted RBP18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 KCNB2Q92953 911 aa18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 DDX19AQ9NUU7 478 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-207ENST00000482227 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 CYP46A1Q9Y6A2 500 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 NR1I2O75469 434 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 POLA2Q14181 598 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 ELF2Q15723 593 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 ZNF446Q9NWS9 450 aa18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 TFIP11Q9UBB9 837 aaKnown RBP18.4■□□□□ 0.54
CNKSR1-207ENST00000482227 NPHP3Q7Z494 1330 aa18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 PDE4CQ08493 712 aa18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 TIGD1Q96MW7 591 aa18.39■□□□□ 0.53
CNKSR1-207ENST00000482227 PTPN14Q15678 1187 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 ERO1AQ96HE7 468 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 SPATA32Q96LK8 384 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 SCAND2PQ9GZW5 306 aaPredicted RBP18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 IQCB1Q15051 598 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 SLFNL1Q499Z3 407 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 PGBD1Q96JS3 809 aa18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
CNKSR1-207ENST00000482227 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 ERICH4A6NGS2 130 aa18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 SKILP12757 684 aa18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 SARM1Q6SZW1 724 aa18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
CNKSR1-207ENST00000482227 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
CNKSR1-207ENST00000482227 GOLGA6L4A6NEF3 574 aa18.36■□□□□ 0.53
CNKSR1-207ENST00000482227 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
CNKSR1-207ENST00000482227 CCDC61Q9Y6R9 512 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms