RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 LCE2CQ5TA81 110 aa9.71□□□□□ -0.86
CTNNB1-213ENST00000482042 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.86
CTNNB1-213ENST00000482042 SOS2Q07890 1332 aaPredicted RBP9.71□□□□□ -0.86
CTNNB1-213ENST00000482042 ANKRD30BQ9BXX2 1392 aa9.71□□□□□ -0.86
CTNNB1-213ENST00000482042 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 CLSPNQ9HAW4 1339 aa9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 DIP2AQ14689 1571 aa9.7□□□□□ -0.86
CTNNB1-213ENST00000482042 CHD2O14647 1828 aaKnown RBP9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 KIAA1210Q9ULL0 1709 aa9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 RPGRIP1LQ68CZ1 1315 aa9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 SPINT1O43278 529 aa9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 MCCD1P59942 119 aaPredicted RBP9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 ZNF784Q8NCA9 323 aaPredicted RBP9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
CTNNB1-213ENST00000482042 MED14O60244 1454 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 SCAF11Q99590 1463 aaKnown RBP9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 TMEM2Q9UHN6 1383 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 MAN1A2O60476 641 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 LILRA1O75019 489 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 RAB15P59190 212 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 ANKLE2Q86XL3 938 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
CTNNB1-213ENST00000482042 H3BM21 787 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 WIPF1O43516 503 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
CTNNB1-213ENST00000482042 SETD1AO15047 1707 aaKnown RBP9.66□□□□□ -0.86
CTNNB1-213ENST00000482042 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
CTNNB1-213ENST00000482042 SETBP1Q9Y6X0 1596 aa9.66□□□□□ -0.86
CTNNB1-213ENST00000482042 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
CTNNB1-213ENST00000482042 ADH1AP07327 375 aa9.65□□□□□ -0.86
CTNNB1-213ENST00000482042 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
CTNNB1-213ENST00000482042 MYOM2P54296 1465 aa9.65□□□□□ -0.86
CTNNB1-213ENST00000482042 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 PLEKHG1Q9ULL1 1385 aa9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
CTNNB1-213ENST00000482042 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 HSPA2P54652 639 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 TXNDC2Q86VQ3 553 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 PRM3Q9NNZ6 103 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 VEGFBP49765 207 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 RELBQ01201 579 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.63□□□□□ -0.871e-6■■□□□ 13.7
CTNNB1-213ENST00000482042 KDF1Q8NAX2 398 aaPredicted RBP9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 IRF7Q92985 503 aa9.63□□□□□ -0.87
CTNNB1-213ENST00000482042 CCER1Q8TC90 406 aaPredicted RBP9.62□□□□□ -0.87
CTNNB1-213ENST00000482042 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
CTNNB1-213ENST00000482042 TRPM1Q7Z4N2 1603 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 VSIG8P0DPA2 414 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 PTGIRP43119 386 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 IRF5Q13568 498 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 MCM6Q14566 821 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
CTNNB1-213ENST00000482042 TONSLQ96HA7 1378 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 NWD1Q149M9 1564 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 STRCP1A6NGW2 1772 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 CTSOP43234 321 aaPredicted RBP9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 ERVK-9P63128 1117 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 INSM2Q96T92 566 aaPredicted RBP9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 PIK3R4Q99570 1358 aa9.6□□□□□ -0.87
CTNNB1-213ENST00000482042 NRXN1Q9ULB1 1477 aa9.59□□□□□ -0.87
CTNNB1-213ENST00000482042 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
CTNNB1-213ENST00000482042 CPS1P31327 1500 aa9.59□□□□□ -0.87
CTNNB1-213ENST00000482042 LTKP29376 864 aa9.59□□□□□ -0.87
CTNNB1-213ENST00000482042 XRN1Q8IZH2 1706 aaKnown RBP9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 CC2D2BQ6DHV5 1058 aa9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 ZNF395Q9H8N7 513 aaPredicted RBP9.58□□□□□ -0.88
CTNNB1-213ENST00000482042 PIK3C2GO75747 1445 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 FIGNL2A6NMB9 653 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 GMPRP36959 345 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 RNF217Q8TC41 542 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 DCAF11Q8TEB1 546 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 SIN3AQ96ST3 1273 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 GDPD2Q9HCC8 539 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 POLMQ9NP87 494 aaPredicted RBP9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
CTNNB1-213ENST00000482042 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
CTNNB1-213ENST00000482042 ARHGEF28Q8N1W1 1705 aaKnown RBP9.56□□□□□ -0.88
CTNNB1-213ENST00000482042 INSM1Q01101 510 aaPredicted RBP9.56□□□□□ -0.88
CTNNB1-213ENST00000482042 PTSQ03393 145 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms