RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-217ENST00000481875 KCNQ3O43525 872 aa15.4■□□□□ 0.06
GARNL3-217ENST00000481875 SNRPA1P09661 255 aaKnown RBP15.4■□□□□ 0.06
GARNL3-217ENST00000481875 VEGFAP15692 232 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-217ENST00000481875 USP16Q9Y5T5 823 aa15.4■□□□□ 0.06
GARNL3-217ENST00000481875 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
GARNL3-217ENST00000481875 KLRG2A4D1S0 409 aaPredicted RBP15.39■□□□□ 0.05
GARNL3-217ENST00000481875 RASSF7Q02833 373 aa15.39■□□□□ 0.05
GARNL3-217ENST00000481875 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
GARNL3-217ENST00000481875 BICDL1Q6ZP65 573 aa15.39■□□□□ 0.05
GARNL3-217ENST00000481875 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
GARNL3-217ENST00000481875 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
GARNL3-217ENST00000481875 SMC1BQ8NDV3 1235 aa15.39■□□□□ 0.05
GARNL3-217ENST00000481875 SLX4Q8IY92 1834 aa15.38■□□□□ 0.05
GARNL3-217ENST00000481875 U2AF1L5P0DN76 240 aaPredicted RBP15.38■□□□□ 0.05
GARNL3-217ENST00000481875 SRGNP10124 158 aa15.38■□□□□ 0.05
GARNL3-217ENST00000481875 U2AF1Q01081 240 aaKnown RBP eCLIP15.38■□□□□ 0.05
GARNL3-217ENST00000481875 DZIP3Q86Y13 1208 aaKnown RBP15.38■□□□□ 0.05
GARNL3-217ENST00000481875 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
GARNL3-217ENST00000481875 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
GARNL3-217ENST00000481875 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
GARNL3-217ENST00000481875 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
GARNL3-217ENST00000481875 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
GARNL3-217ENST00000481875 DLG5Q8TDM6 1919 aa15.37■□□□□ 0.05
GARNL3-217ENST00000481875 TAF7Q15545 349 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-217ENST00000481875 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
GARNL3-217ENST00000481875 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
GARNL3-217ENST00000481875 ZNF652Q9Y2D9 606 aa15.36■□□□□ 0.05
GARNL3-217ENST00000481875 POTECB2RU33 542 aa15.35■□□□□ 0.05
GARNL3-217ENST00000481875 ST5P78524 1137 aa15.35■□□□□ 0.05
GARNL3-217ENST00000481875 MCM10Q7L590 875 aa15.35■□□□□ 0.05
GARNL3-217ENST00000481875 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
GARNL3-217ENST00000481875 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
GARNL3-217ENST00000481875 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
GARNL3-217ENST00000481875 C21orf2O43822 256 aa15.34■□□□□ 0.05
GARNL3-217ENST00000481875 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
GARNL3-217ENST00000481875 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
GARNL3-217ENST00000481875 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-217ENST00000481875 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
GARNL3-217ENST00000481875 CACNA1SQ13698 1873 aa15.33■□□□□ 0.05
GARNL3-217ENST00000481875 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
GARNL3-217ENST00000481875 TPTE2Q6XPS3 522 aa15.33■□□□□ 0.04
GARNL3-217ENST00000481875 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
GARNL3-217ENST00000481875 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
GARNL3-217ENST00000481875 CNGB1Q14028 1251 aaPredicted RBP15.32■□□□□ 0.04
GARNL3-217ENST00000481875 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
GARNL3-217ENST00000481875 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
GARNL3-217ENST00000481875 NBPF5PQ86XG9 351 aaPredicted RBP15.32■□□□□ 0.04
GARNL3-217ENST00000481875 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
GARNL3-217ENST00000481875 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
GARNL3-217ENST00000481875 SCN4AP35499 1836 aa15.31■□□□□ 0.04
GARNL3-217ENST00000481875 NUP98P52948 1817 aa15.31■□□□□ 0.04
GARNL3-217ENST00000481875 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
GARNL3-217ENST00000481875 NPR1P16066 1061 aa15.31■□□□□ 0.04
GARNL3-217ENST00000481875 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
GARNL3-217ENST00000481875 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
GARNL3-217ENST00000481875 NPHP1O15259 732 aa15.29■□□□□ 0.04
GARNL3-217ENST00000481875 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
GARNL3-217ENST00000481875 L3MBTL3Q96JM7 780 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-217ENST00000481875 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
GARNL3-217ENST00000481875 NIP7Q9Y221 180 aaKnown RBP eCLIP15.29■□□□□ 0.04
GARNL3-217ENST00000481875 NEFMP07197 916 aa15.28■□□□□ 0.04
GARNL3-217ENST00000481875 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
GARNL3-217ENST00000481875 PIP4K2AP48426 406 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-217ENST00000481875 HTRA3P83110 453 aa15.28■□□□□ 0.04
GARNL3-217ENST00000481875 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.04
GARNL3-217ENST00000481875 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
GARNL3-217ENST00000481875 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.04
GARNL3-217ENST00000481875 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
GARNL3-217ENST00000481875 HLFQ16534 295 aa15.27■□□□□ 0.04
GARNL3-217ENST00000481875 CCDC93Q567U6 631 aa15.27■□□□□ 0.04
GARNL3-217ENST00000481875 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
GARNL3-217ENST00000481875 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
GARNL3-217ENST00000481875 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
GARNL3-217ENST00000481875 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
GARNL3-217ENST00000481875 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
GARNL3-217ENST00000481875 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
GARNL3-217ENST00000481875 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
GARNL3-217ENST00000481875 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
GARNL3-217ENST00000481875 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
GARNL3-217ENST00000481875 HOXA10P31260 410 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-217ENST00000481875 CC2D2BQ6DHV5 1058 aa15.25■□□□□ 0.03
GARNL3-217ENST00000481875 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
GARNL3-217ENST00000481875 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-217ENST00000481875 DDNO94850 711 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-217ENST00000481875 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
GARNL3-217ENST00000481875 PSMD1Q99460 953 aa15.24■□□□□ 0.03
GARNL3-217ENST00000481875 FZD9O00144 591 aa15.23■□□□□ 0.03
GARNL3-217ENST00000481875 CREBZFQ9NS37 354 aa15.23■□□□□ 0.03
GARNL3-217ENST00000481875 LRP10Q7Z4F1 713 aa15.22■□□□□ 0.03
GARNL3-217ENST00000481875 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
GARNL3-217ENST00000481875 ZNF34Q8IZ26 560 aa15.22■□□□□ 0.03
GARNL3-217ENST00000481875 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
GARNL3-217ENST00000481875 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
GARNL3-217ENST00000481875 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.03
GARNL3-217ENST00000481875 GIGYF2Q6Y7W6 1299 aaKnown RBP15.21■□□□□ 0.03
GARNL3-217ENST00000481875 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
GARNL3-217ENST00000481875 ANP32CO43423 234 aa15.2■□□□□ 0.02
GARNL3-217ENST00000481875 GTF2E1P29083 439 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-217ENST00000481875 RALBP1Q15311 655 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms