RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 PLBD2Q8NHP8 589 aa26.45■■□□□ 1.82
VPS16-207ENST00000481812 SCN7AQ01118 1682 aa26.44■■□□□ 1.82
VPS16-207ENST00000481812 USP42Q9H9J4 1324 aaKnown RBP26.43■■□□□ 1.82
VPS16-207ENST00000481812 IPO8O15397 1037 aaKnown RBP26.43■■□□□ 1.82
VPS16-207ENST00000481812 ZPR1O75312 459 aa26.43■■□□□ 1.82
VPS16-207ENST00000481812 CAMTA2O94983 1202 aa26.43■■□□□ 1.82
VPS16-207ENST00000481812 SMIM5Q71RC9 77 aa26.43■■□□□ 1.82
VPS16-207ENST00000481812 TBC1D2BQ9UPU7 963 aa26.43■■□□□ 1.82
VPS16-207ENST00000481812 NUP98P52948 1817 aa26.43■■□□□ 1.82
VPS16-207ENST00000481812 FKBP5Q13451 457 aaPredicted RBP26.42■■□□□ 1.82
VPS16-207ENST00000481812 CLEC4GQ6UXB4 293 aa26.42■■□□□ 1.82
VPS16-207ENST00000481812 KSR2Q6VAB6 950 aa26.42■■□□□ 1.82
VPS16-207ENST00000481812 NOB1Q9ULX3 412 aaKnown RBP26.42■■□□□ 1.82
VPS16-207ENST00000481812 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
VPS16-207ENST00000481812 CENPBP07199 599 aaPredicted RBP26.41■■□□□ 1.82
VPS16-207ENST00000481812 SLC16A10Q8TF71 515 aa26.41■■□□□ 1.82
VPS16-207ENST00000481812 GIGYF2Q6Y7W6 1299 aaKnown RBP26.4■■□□□ 1.82
VPS16-207ENST00000481812 ARXQ96QS3 562 aa26.4■■□□□ 1.82
VPS16-207ENST00000481812 ADCY9O60503 1353 aa26.39■■□□□ 1.82
VPS16-207ENST00000481812 PI4KAP2A4QPH2 592 aa26.39■■□□□ 1.82
VPS16-207ENST00000481812 RIC3Q7Z5B4 369 aa26.39■■□□□ 1.82
VPS16-207ENST00000481812 PI4KAP1Q8N8J0 262 aa26.39■■□□□ 1.82
VPS16-207ENST00000481812 API5Q9BZZ5 524 aaKnown RBP26.39■■□□□ 1.82
VPS16-207ENST00000481812 ZNF652Q9Y2D9 606 aa26.39■■□□□ 1.82
VPS16-207ENST00000481812 CASZ1Q86V15 1759 aa26.38■■□□□ 1.81
VPS16-207ENST00000481812 USPL1Q5W0Q7 1092 aa26.38■■□□□ 1.81
VPS16-207ENST00000481812 ZKSCAN2Q63HK3 967 aa26.38■■□□□ 1.81
VPS16-207ENST00000481812 R3HDM1Q15032 1099 aaKnown RBP26.37■■□□□ 1.81
VPS16-207ENST00000481812 HSP90AB3PQ58FF7 597 aa26.37■■□□□ 1.81
VPS16-207ENST00000481812 ATF7IPQ6VMQ6 1270 aa26.37■■□□□ 1.81
VPS16-207ENST00000481812 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.37■■□□□ 1.81
VPS16-207ENST00000481812 ZBTB3Q9H5J0 574 aa26.37■■□□□ 1.81
VPS16-207ENST00000481812 BCL2L12Q9HB09 334 aa26.37■■□□□ 1.81
VPS16-207ENST00000481812 SRP68Q9UHB9 627 aaKnown RBP26.37■■□□□ 1.81
VPS16-207ENST00000481812 ANKRD36CQ5JPF3 1778 aa26.37■■□□□ 1.81
VPS16-207ENST00000481812 GYS1P13807 737 aa26.36■■□□□ 1.81
VPS16-207ENST00000481812 DNAAF4Q8WXU2 420 aa26.36■■□□□ 1.81
VPS16-207ENST00000481812 METTL22Q9BUU2 404 aaPredicted RBP26.36■■□□□ 1.81
VPS16-207ENST00000481812 MAP3K2Q9Y2U5 619 aa26.36■■□□□ 1.81
VPS16-207ENST00000481812 MSH5O43196 834 aa26.35■■□□□ 1.81
VPS16-207ENST00000481812 HLFQ16534 295 aa26.35■■□□□ 1.81
VPS16-207ENST00000481812 FRAT1Q92837 279 aaPredicted RBP26.35■■□□□ 1.81
VPS16-207ENST00000481812 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
VPS16-207ENST00000481812 TCIRG1Q13488 830 aa26.34■■□□□ 1.81
VPS16-207ENST00000481812 NLGN1Q8N2Q7 840 aa26.34■■□□□ 1.81
VPS16-207ENST00000481812 PXDNLA1KZ92 1463 aa26.34■■□□□ 1.81
VPS16-207ENST00000481812 N4BP2Q86UW6 1770 aaPredicted RBP26.33■■□□□ 1.81
VPS16-207ENST00000481812 MS4A1P11836 297 aa26.33■■□□□ 1.81
VPS16-207ENST00000481812 TRIM28Q13263 835 aaKnown RBP26.33■■□□□ 1.81
VPS16-207ENST00000481812 RNF123Q5XPI4 1314 aa26.33■■□□□ 1.81
VPS16-207ENST00000481812 COL24A1Q17RW2 1714 aa26.32■■□□□ 1.8
VPS16-207ENST00000481812 TRIM27P14373 513 aa26.32■■□□□ 1.8
VPS16-207ENST00000481812 NEXNQ0ZGT2 675 aa26.32■■□□□ 1.8
VPS16-207ENST00000481812 F6X3S4 739 aa26.31■■□□□ 1.8
VPS16-207ENST00000481812 ZNF34Q8IZ26 560 aa26.31■■□□□ 1.8
VPS16-207ENST00000481812 ISCA1Q9BUE6 129 aa26.31■■□□□ 1.8
VPS16-207ENST00000481812 IBTKQ9P2D0 1353 aaPredicted RBP26.31■■□□□ 1.8
VPS16-207ENST00000481812 FKBP8Q14318 412 aa26.3■■□□□ 1.8
VPS16-207ENST00000481812 PDGFDQ9GZP0 370 aaPredicted RBP26.3■■□□□ 1.8
VPS16-207ENST00000481812 ABCC4O15439 1325 aa26.3■■□□□ 1.8
VPS16-207ENST00000481812 TM4SF1P30408 202 aa26.29■■□□□ 1.8
VPS16-207ENST00000481812 RRP1P56182 461 aaKnown RBP26.29■■□□□ 1.8
VPS16-207ENST00000481812 LINS1Q8NG48 757 aa26.29■■□□□ 1.8
VPS16-207ENST00000481812 PSDA5PKW4 1024 aaPredicted RBP26.28■■□□□ 1.8
VPS16-207ENST00000481812 PDE3AQ14432 1141 aa26.28■■□□□ 1.8
VPS16-207ENST00000481812 PARP10Q53GL7 1025 aa26.28■■□□□ 1.8
VPS16-207ENST00000481812 BEND3Q5T5X7 828 aa26.28■■□□□ 1.8
VPS16-207ENST00000481812 TBC1D9BQ66K14 1250 aa26.28■■□□□ 1.8
VPS16-207ENST00000481812 MYD88Q99836 296 aa26.28■■□□□ 1.8
VPS16-207ENST00000481812 AFDNP55196 1824 aaKnown RBP26.28■■□□□ 1.8
VPS16-207ENST00000481812 CCT4P50991 539 aaKnown RBP26.27■■□□□ 1.8
VPS16-207ENST00000481812 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
VPS16-207ENST00000481812 CCDC191Q8NCU4 936 aa26.27■■□□□ 1.8
VPS16-207ENST00000481812 MTFR1LQ9H019 292 aa26.27■■□□□ 1.8
VPS16-207ENST00000481812 NIP7Q9Y221 180 aaKnown RBP eCLIP26.27■■□□□ 1.8
VPS16-207ENST00000481812 ALDH1L1O75891 902 aa26.26■■□□□ 1.79
VPS16-207ENST00000481812 IGKV5-2P06315 115 aa26.26■■□□□ 1.79
VPS16-207ENST00000481812 INTS3Q68E01 1043 aaKnown RBP26.26■■□□□ 1.79
VPS16-207ENST00000481812 SETDB2Q96T68 719 aa26.26■■□□□ 1.79
VPS16-207ENST00000481812 PLIN1O60240 522 aa26.25■■□□□ 1.79
VPS16-207ENST00000481812 NFIXQ14938 502 aa26.25■■□□□ 1.79
VPS16-207ENST00000481812 SLC4A10Q6U841 1118 aa26.25■■□□□ 1.79
VPS16-207ENST00000481812 SRCIN1Q9C0H9 1055 aa26.25■■□□□ 1.79
VPS16-207ENST00000481812 SUPT16HQ9Y5B9 1047 aaKnown RBP26.25■■□□□ 1.79
VPS16-207ENST00000481812 NEURL1BA8MQ27 555 aa26.24■■□□□ 1.79
VPS16-207ENST00000481812 NLRP10Q86W26 655 aa26.24■■□□□ 1.79
VPS16-207ENST00000481812 FTSJ3Q8IY81 847 aaKnown RBP26.24■■□□□ 1.79
VPS16-207ENST00000481812 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
VPS16-207ENST00000481812 UBN2Q6ZU65 1347 aa26.23■■□□□ 1.79
VPS16-207ENST00000481812 ATP5J2-PTCD1G3V325 749 aa26.23■■□□□ 1.79
VPS16-207ENST00000481812 CLUAP1Q96AJ1 413 aa26.23■■□□□ 1.79
VPS16-207ENST00000481812 TNNQ9UQP3 1299 aa26.23■■□□□ 1.79
VPS16-207ENST00000481812 GPTP24298 496 aa26.22■■□□□ 1.79
VPS16-207ENST00000481812 PPP1R42Q7Z4L9 355 aa26.22■■□□□ 1.79
VPS16-207ENST00000481812 CWC25Q9NXE8 425 aaPredicted RBP26.22■■□□□ 1.79
VPS16-207ENST00000481812 NRXN2Q9P2S2 1712 aa26.22■■□□□ 1.79
VPS16-207ENST00000481812 POLRMTO00411 1230 aaKnown RBP26.2■■□□□ 1.78
VPS16-207ENST00000481812 RLBP1P12271 317 aa26.2■■□□□ 1.78
VPS16-207ENST00000481812 GCKRQ14397 625 aa26.2■■□□□ 1.78
VPS16-207ENST00000481812 CWF19L2Q2TBE0 894 aaKnown RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms