RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SHISA2Q6UWI4 295 aa7.68□□□□□ -1.18
COPA-204ENST00000481522 TBC1D2BQ9UPU7 963 aa7.68□□□□□ -1.18
COPA-204ENST00000481522 ADAMTS4O75173 837 aa7.67□□□□□ -1.18
COPA-204ENST00000481522 STARD13Q9Y3M8 1113 aa7.67□□□□□ -1.18
COPA-204ENST00000481522 ABL2P42684 1182 aa7.66□□□□□ -1.18
COPA-204ENST00000481522 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
COPA-204ENST00000481522 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
COPA-204ENST00000481522 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
COPA-204ENST00000481522 ALBP02768 609 aa7.65□□□□□ -1.18
COPA-204ENST00000481522 MAPTP10636 758 aaKnown RBP7.65□□□□□ -1.18
COPA-204ENST00000481522 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
COPA-204ENST00000481522 TNP2Q05952 138 aa7.65□□□□□ -1.18
COPA-204ENST00000481522 NLRP8Q86W28 1048 aa7.65□□□□□ -1.18
COPA-204ENST00000481522 POU5F2Q8N7G0 328 aa7.65□□□□□ -1.18
COPA-204ENST00000481522 GDPD2Q9HCC8 539 aa7.65□□□□□ -1.18
COPA-204ENST00000481522 DCDC2BA2VCK2 349 aa7.64□□□□□ -1.19
COPA-204ENST00000481522 ATXN7O15265 892 aaPredicted RBP7.64□□□□□ -1.19
COPA-204ENST00000481522 RAD21O60216 631 aa7.64□□□□□ -1.19
COPA-204ENST00000481522 WWC1Q8IX03 1113 aa7.64□□□□□ -1.19
COPA-204ENST00000481522 MICALL1Q8N3F8 863 aa7.64□□□□□ -1.19
COPA-204ENST00000481522 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
COPA-204ENST00000481522 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
COPA-204ENST00000481522 GPR37L1O60883 481 aa7.63□□□□□ -1.19
COPA-204ENST00000481522 ALAS2P22557 587 aa7.63□□□□□ -1.19
COPA-204ENST00000481522 PLA2G4AP47712 749 aa7.63□□□□□ -1.19
COPA-204ENST00000481522 TLR1Q15399 786 aa7.63□□□□□ -1.19
COPA-204ENST00000481522 CEP126Q9P2H0 1117 aa7.63□□□□□ -1.19
COPA-204ENST00000481522 PRR23CQ6ZRP0 262 aa7.62□□□□□ -1.19
COPA-204ENST00000481522 ETNK1Q9HBU6 452 aa7.62□□□□□ -1.19
COPA-204ENST00000481522 ADGRE2Q9UHX3 823 aa7.62□□□□□ -1.19
COPA-204ENST00000481522 GTF3C3Q9Y5Q9 886 aa7.62□□□□□ -1.19
COPA-204ENST00000481522 A0A0A0MRY4 1105 aa7.61□□□□□ -1.19
COPA-204ENST00000481522 ATP4AP20648 1035 aa7.61□□□□□ -1.19
COPA-204ENST00000481522 COG6Q9Y2V7 657 aa7.61□□□□□ -1.19
COPA-204ENST00000481522 FSTP19883 344 aa7.6□□□□□ -1.19
COPA-204ENST00000481522 USP4Q13107 963 aa7.6□□□□□ -1.19
COPA-204ENST00000481522 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
COPA-204ENST00000481522 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
COPA-204ENST00000481522 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
COPA-204ENST00000481522 STAU1O95793 577 aaKnown RBP7.59□□□□□ -1.19
COPA-204ENST00000481522 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
COPA-204ENST00000481522 WASHC4Q2M389 1173 aa7.59□□□□□ -1.19
COPA-204ENST00000481522 AIDAQ96BJ3 306 aa7.59□□□□□ -1.19
COPA-204ENST00000481522 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
COPA-204ENST00000481522 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
COPA-204ENST00000481522 VAC14Q08AM6 782 aa7.58□□□□□ -1.2
COPA-204ENST00000481522 IRF5Q13568 498 aa7.58□□□□□ -1.2
COPA-204ENST00000481522 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
COPA-204ENST00000481522 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
COPA-204ENST00000481522 SPINK2P20155 84 aa7.57□□□□□ -1.2
COPA-204ENST00000481522 ARSJQ5FYB0 599 aaPredicted RBP7.57□□□□□ -1.2
COPA-204ENST00000481522 TRAPPC3LQ5T215 181 aa7.57□□□□□ -1.2
COPA-204ENST00000481522 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
COPA-204ENST00000481522 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
COPA-204ENST00000481522 SYT9Q86SS6 491 aa7.56□□□□□ -1.2
COPA-204ENST00000481522 SIRT1Q96EB6 747 aa7.56□□□□□ -1.2
COPA-204ENST00000481522 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
COPA-204ENST00000481522 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
COPA-204ENST00000481522 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
COPA-204ENST00000481522 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
COPA-204ENST00000481522 USP21Q9UK80 565 aa7.55□□□□□ -1.2
COPA-204ENST00000481522 INHAP05111 366 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 SOX11P35716 441 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 GDF10P55107 478 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 TSGA10IPQ3SY00 556 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 MEGF10Q96KG7 1140 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 MARK1Q9P0L2 795 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 GJA3Q9Y6H8 435 aa7.54□□□□□ -1.2
COPA-204ENST00000481522 SIN3BO75182 1162 aa7.53□□□□□ -1.2
COPA-204ENST00000481522 TGFB1P01137 390 aa7.53□□□□□ -1.2
COPA-204ENST00000481522 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
COPA-204ENST00000481522 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
COPA-204ENST00000481522 PROSER2Q86WR7 435 aaPredicted RBP7.53□□□□□ -1.2
COPA-204ENST00000481522 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
COPA-204ENST00000481522 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
COPA-204ENST00000481522 NOS3P29474 1203 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 SCNN1DP51172 638 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 SMTNP53814 917 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 TNFRSF25Q93038 417 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 ZDHHC3Q9NYG2 299 aa7.52□□□□□ -1.21
COPA-204ENST00000481522 EFSO43281 561 aa7.5□□□□□ -1.21
COPA-204ENST00000481522 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
COPA-204ENST00000481522 RAC1P63000 192 aa7.5□□□□□ -1.21
COPA-204ENST00000481522 ILDR2Q71H61 639 aa7.5□□□□□ -1.21
COPA-204ENST00000481522 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
COPA-204ENST00000481522 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
COPA-204ENST00000481522 NCANO14594 1321 aa7.49□□□□□ -1.21
COPA-204ENST00000481522 A6NJR5 290 aa7.48□□□□□ -1.21
COPA-204ENST00000481522 CDK2AP1O14519 115 aa7.48□□□□□ -1.21
COPA-204ENST00000481522 BICDL1Q6ZP65 573 aa7.48□□□□□ -1.21
COPA-204ENST00000481522 CHIC2Q9UKJ5 165 aa7.48□□□□□ -1.21
COPA-204ENST00000481522 IQSEC3Q9UPP2 1182 aaPredicted RBP7.48□□□□□ -1.21
COPA-204ENST00000481522 A6NJY4 79 aa7.47□□□□□ -1.21
COPA-204ENST00000481522 SLC4A9Q96Q91 983 aa7.47□□□□□ -1.21
COPA-204ENST00000481522 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
COPA-204ENST00000481522 SERTAD1Q9UHV2 236 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms