RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 A1BGP04217 495 aa23.48■■□□□ 1.35
RXRB-203ENST00000481441 TEFQ10587 303 aa23.48■■□□□ 1.35
RXRB-203ENST00000481441 LDHDQ86WU2 507 aa23.48■■□□□ 1.35
RXRB-203ENST00000481441 MASTLQ96GX5 879 aa23.48■■□□□ 1.35
RXRB-203ENST00000481441 PRDM10Q9NQV6 1147 aa23.48■■□□□ 1.35
RXRB-203ENST00000481441 ST5P78524 1137 aa23.47■■□□□ 1.35
RXRB-203ENST00000481441 C7orf43Q8WVR3 580 aa23.47■■□□□ 1.35
RXRB-203ENST00000481441 TAF1DQ9H5J8 278 aaPredicted RBP23.47■■□□□ 1.35
RXRB-203ENST00000481441 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
RXRB-203ENST00000481441 NPHP1O15259 732 aa23.45■■□□□ 1.34
RXRB-203ENST00000481441 ITGBL1O95965 494 aaPredicted RBP23.45■■□□□ 1.34
RXRB-203ENST00000481441 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
RXRB-203ENST00000481441 COL3A1P02461 1466 aaPredicted RBP23.45■■□□□ 1.34
RXRB-203ENST00000481441 ADAMTSL1Q8N6G6 1762 aa23.44■■□□□ 1.34
RXRB-203ENST00000481441 VEGFBP49765 207 aa23.43■■□□□ 1.34
RXRB-203ENST00000481441 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
RXRB-203ENST00000481441 DZIP3Q86Y13 1208 aaKnown RBP23.43■■□□□ 1.34
RXRB-203ENST00000481441 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
RXRB-203ENST00000481441 CEMIPQ8WUJ3 1361 aa23.42■■□□□ 1.34
RXRB-203ENST00000481441 TMEM88BA6NKF7 163 aa23.42■■□□□ 1.34
RXRB-203ENST00000481441 CTCFP49711 727 aaPredicted RBP23.42■■□□□ 1.34
RXRB-203ENST00000481441 PER1O15534 1290 aaPredicted RBP23.41■■□□□ 1.34
RXRB-203ENST00000481441 KCNQ3O43525 872 aa23.41■■□□□ 1.34
RXRB-203ENST00000481441 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
RXRB-203ENST00000481441 ZNF541Q9H0D2 1346 aa23.41■■□□□ 1.34
RXRB-203ENST00000481441 AIDAQ96BJ3 306 aa23.4■■□□□ 1.34
RXRB-203ENST00000481441 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
RXRB-203ENST00000481441 WBP1LQ9NX94 342 aa23.4■■□□□ 1.34
RXRB-203ENST00000481441 KIF7Q2M1P5 1343 aa23.4■■□□□ 1.34
RXRB-203ENST00000481441 KLRG2A4D1S0 409 aaPredicted RBP23.39■■□□□ 1.34
RXRB-203ENST00000481441 FKBP4Q02790 459 aaKnown RBP eCLIP23.39■■□□□ 1.34
RXRB-203ENST00000481441 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.34
RXRB-203ENST00000481441 CLEC4GQ6UXB4 293 aa23.39■■□□□ 1.34
RXRB-203ENST00000481441 NBPF5PQ86XG9 351 aaPredicted RBP23.39■■□□□ 1.34
RXRB-203ENST00000481441 USP16Q9Y5T5 823 aa23.39■■□□□ 1.34
RXRB-203ENST00000481441 NPR1P16066 1061 aa23.38■■□□□ 1.33
RXRB-203ENST00000481441 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
RXRB-203ENST00000481441 EAPPQ56P03 285 aaPredicted RBP23.38■■□□□ 1.33
RXRB-203ENST00000481441 ZNF277Q9NRM2 450 aaPredicted RBP23.38■■□□□ 1.33
RXRB-203ENST00000481441 HACL1Q9UJ83 578 aa23.38■■□□□ 1.33
RXRB-203ENST00000481441 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
RXRB-203ENST00000481441 BTBD11A6QL63 1104 aa23.36■■□□□ 1.33
RXRB-203ENST00000481441 EPHX2P34913 555 aa23.36■■□□□ 1.33
RXRB-203ENST00000481441 OLFM4Q6UX06 510 aa23.36■■□□□ 1.33
RXRB-203ENST00000481441 RASSF10A6NK89 507 aa23.35■■□□□ 1.33
RXRB-203ENST00000481441 LBX1P52954 281 aa23.35■■□□□ 1.33
RXRB-203ENST00000481441 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
RXRB-203ENST00000481441 PRAMEF22A3QJZ6 481 aa23.34■■□□□ 1.33
RXRB-203ENST00000481441 RTKN2Q8IZC4 609 aa23.34■■□□□ 1.33
RXRB-203ENST00000481441 ZNF652Q9Y2D9 606 aa23.34■■□□□ 1.33
RXRB-203ENST00000481441 FZD9O00144 591 aa23.33■■□□□ 1.33
RXRB-203ENST00000481441 TPTE2Q6XPS3 522 aa23.33■■□□□ 1.33
RXRB-203ENST00000481441 PNMA8AQ86V59 439 aaPredicted RBP23.33■■□□□ 1.33
RXRB-203ENST00000481441 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
RXRB-203ENST00000481441 RGL2O15211 777 aa23.33■■□□□ 1.32
RXRB-203ENST00000481441 DEFB115Q30KQ5 88 aa23.33■■□□□ 1.32
RXRB-203ENST00000481441 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.32
RXRB-203ENST00000481441 CNTROBQ8N137 903 aa23.33■■□□□ 1.32
RXRB-203ENST00000481441 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
RXRB-203ENST00000481441 HSPA8P11142 646 aaKnown RBP23.32■■□□□ 1.32
RXRB-203ENST00000481441 IARSP41252 1262 aaKnown RBP23.32■■□□□ 1.32
RXRB-203ENST00000481441 SNED1Q8TER0 1413 aa23.32■■□□□ 1.32
RXRB-203ENST00000481441 NPC1L1Q9UHC9 1359 aa23.31■■□□□ 1.32
RXRB-203ENST00000481441 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
RXRB-203ENST00000481441 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
RXRB-203ENST00000481441 NBPF26B4DH59 902 aa23.3■■□□□ 1.32
RXRB-203ENST00000481441 SNRPA1P09661 255 aaKnown RBP23.3■■□□□ 1.32
RXRB-203ENST00000481441 NBPF10Q6P3W6 841 aaKnown RBP23.3■■□□□ 1.32
RXRB-203ENST00000481441 GPC2Q8N158 579 aa23.3■■□□□ 1.32
RXRB-203ENST00000481441 NBPF15Q8N660 670 aa23.3■■□□□ 1.32
RXRB-203ENST00000481441 WDR33Q9C0J8 1336 aaKnown RBP23.29■■□□□ 1.32
RXRB-203ENST00000481441 ALDH1B1P30837 517 aa23.29■■□□□ 1.32
RXRB-203ENST00000481441 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
RXRB-203ENST00000481441 ABHD8Q96I13 439 aa23.29■■□□□ 1.32
RXRB-203ENST00000481441 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
RXRB-203ENST00000481441 THSD7BQ9C0I4 1608 aa23.28■■□□□ 1.32
RXRB-203ENST00000481441 LTBP1Q14766 1721 aa23.27■■□□□ 1.32
RXRB-203ENST00000481441 FAM177BA6PVY3 158 aa23.27■■□□□ 1.32
RXRB-203ENST00000481441 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
RXRB-203ENST00000481441 PSMD1Q99460 953 aa23.27■■□□□ 1.32
RXRB-203ENST00000481441 COL4A5P29400 1685 aa23.26■■□□□ 1.31
RXRB-203ENST00000481441 DDX21Q9NR30 783 aaKnown RBP eCLIP23.26■■□□□ 1.31
RXRB-203ENST00000481441 ABT1Q9ULW3 272 aaKnown RBP23.26■■□□□ 1.31
RXRB-203ENST00000481441 HLFQ16534 295 aa23.25■■□□□ 1.31
RXRB-203ENST00000481441 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
RXRB-203ENST00000481441 JDP2Q8WYK2 163 aa23.25■■□□□ 1.31
RXRB-203ENST00000481441 SLC34A2O95436 690 aa23.24■■□□□ 1.31
RXRB-203ENST00000481441 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
RXRB-203ENST00000481441 MCM10Q7L590 875 aa23.24■■□□□ 1.31
RXRB-203ENST00000481441 ABCC12Q96J65 1359 aa23.23■■□□□ 1.31
RXRB-203ENST00000481441 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
RXRB-203ENST00000481441 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
RXRB-203ENST00000481441 NUP98P52948 1817 aa23.22■■□□□ 1.31
RXRB-203ENST00000481441 GTF2E1P29083 439 aaPredicted RBP23.22■■□□□ 1.31
RXRB-203ENST00000481441 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
RXRB-203ENST00000481441 FMR1Q06787 632 aaKnown RBP eCLIP23.21■■□□□ 1.31
RXRB-203ENST00000481441 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
RXRB-203ENST00000481441 CC2D2BQ6DHV5 1058 aa23.21■■□□□ 1.31
RXRB-203ENST00000481441 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
RXRB-203ENST00000481441 GJA3Q9Y6H8 435 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms