RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 SCAPERQ9BY12 1400 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 DYRK3O43781 588 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 F11P03951 625 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 WDR44Q5JSH3 913 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 HECW2Q9P2P5 1572 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 ABCC1P33527 1531 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 LILRA1O75019 489 aa9.81□□□□□ -0.84
VPS50-215ENST00000480943 ADD1P35611 737 aaKnown RBP9.81□□□□□ -0.84
VPS50-215ENST00000480943 DGKGP49619 791 aa9.81□□□□□ -0.84
VPS50-215ENST00000480943 PTK2Q05397 1052 aa9.81□□□□□ -0.84
VPS50-215ENST00000480943 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
VPS50-215ENST00000480943 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
VPS50-215ENST00000480943 KDM5CP41229 1560 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 PAX4O43316 350 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 SLC27A3Q5K4L6 730 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
VPS50-215ENST00000480943 ABCA6Q8N139 1617 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 POU4F2Q12837 409 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 ARID4BQ4LE39 1312 aaPredicted RBP9.79□□□□□ -0.84
VPS50-215ENST00000480943 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
VPS50-215ENST00000480943 BMP4P12644 408 aa9.78□□□□□ -0.84
VPS50-215ENST00000480943 TIMMDC1Q9NPL8 285 aa9.78□□□□□ -0.84
VPS50-215ENST00000480943 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
VPS50-215ENST00000480943 DIP2CQ9Y2E4 1556 aa9.78□□□□□ -0.84
VPS50-215ENST00000480943 SUPT6HQ7KZ85 1726 aaKnown RBP9.78□□□□□ -0.84
VPS50-215ENST00000480943 KIDINS220Q9ULH0 1771 aa9.78□□□□□ -0.84
VPS50-215ENST00000480943 TIAM1Q13009 1591 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 MEN1O00255 615 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 EPXP11678 715 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 PRSS36Q5K4E3 855 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
VPS50-215ENST00000480943 NBPF15Q8N660 670 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 PTPRMP28827 1452 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 ARHGEF12Q9NZN5 1544 aa9.77□□□□□ -0.85
VPS50-215ENST00000480943 ERVH48-1M5A8F1 160 aa9.76□□□□□ -0.85
VPS50-215ENST00000480943 RAB15P59190 212 aa9.76□□□□□ -0.85
VPS50-215ENST00000480943 ADAM32Q8TC27 787 aa9.76□□□□□ -0.85
VPS50-215ENST00000480943 GJD4Q96KN9 370 aaPredicted RBP9.76□□□□□ -0.85
VPS50-215ENST00000480943 MTUS2Q5JR59 1369 aa9.75□□□□□ -0.85
VPS50-215ENST00000480943 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
VPS50-215ENST00000480943 LBRQ14739 615 aaKnown RBP9.75□□□□□ -0.85
VPS50-215ENST00000480943 MCTP1Q6DN14 999 aa9.75□□□□□ -0.85
VPS50-215ENST00000480943 NLRP3Q96P20 1036 aa9.75□□□□□ -0.85
VPS50-215ENST00000480943 TPSG1Q9NRR2 321 aa9.75□□□□□ -0.85
VPS50-215ENST00000480943 ATP10AO60312 1499 aa9.74□□□□□ -0.85
VPS50-215ENST00000480943 GPATCH8Q9UKJ3 1502 aaKnown RBP9.74□□□□□ -0.85
VPS50-215ENST00000480943 LOC105371045A0A1W2PR82 267 aa9.74□□□□□ -0.85
VPS50-215ENST00000480943 SPATA31C2B4DYI2 1134 aa9.74□□□□□ -0.85
VPS50-215ENST00000480943 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 REREQ9P2R6 1566 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 SPDYE3A6NKU9 549 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 SOCS7O14512 581 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 TAS1R3Q7RTX0 852 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 MTMR14Q8NCE2 650 aa9.73□□□□□ -0.85
VPS50-215ENST00000480943 ATXN7L1Q9ULK2 861 aaPredicted RBP9.73□□□□□ -0.85
VPS50-215ENST00000480943 INO80Q9ULG1 1556 aaPredicted RBP9.72□□□□□ -0.85
VPS50-215ENST00000480943 APBB1O00213 710 aa9.72□□□□□ -0.85
VPS50-215ENST00000480943 AFAP1Q8N556 730 aa9.72□□□□□ -0.85
VPS50-215ENST00000480943 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
VPS50-215ENST00000480943 CCNB3Q8WWL7 1395 aa9.72□□□□□ -0.85
VPS50-215ENST00000480943 MLH3Q9UHC1 1453 aa9.72□□□□□ -0.85
VPS50-215ENST00000480943 ADGBQ8N7X0 1667 aa9.71□□□□□ -0.85
VPS50-215ENST00000480943 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.86
VPS50-215ENST00000480943 APBA3O96018 575 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 MLECQ14165 292 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 SNRKQ9NRH2 765 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 ATP7AQ04656 1500 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 C3P01024 1663 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.86
VPS50-215ENST00000480943 WASLO00401 505 aaPredicted RBP9.7□□□□□ -0.86
VPS50-215ENST00000480943 ARAFP10398 606 aa9.7□□□□□ -0.86
VPS50-215ENST00000480943 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
VPS50-215ENST00000480943 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
VPS50-215ENST00000480943 GRIP2Q9C0E4 1043 aa9.7□□□□□ -0.86
VPS50-215ENST00000480943 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
VPS50-215ENST00000480943 NDUFB9Q9Y6M9 179 aa9.7□□□□□ -0.86
VPS50-215ENST00000480943 A0A1W2PRU2 124 aa9.69□□□□□ -0.86
VPS50-215ENST00000480943 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
VPS50-215ENST00000480943 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
VPS50-215ENST00000480943 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
VPS50-215ENST00000480943 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
VPS50-215ENST00000480943 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
VPS50-215ENST00000480943 AGLP35573 1532 aa9.67□□□□□ -0.86
VPS50-215ENST00000480943 FBXO45P0C2W1 286 aa9.67□□□□□ -0.86
VPS50-215ENST00000480943 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
VPS50-215ENST00000480943 PGBD3Q8N328 593 aa9.67□□□□□ -0.86
VPS50-215ENST00000480943 PLVAPQ9BX97 442 aa9.67□□□□□ -0.86
VPS50-215ENST00000480943 CFDP1Q9UEE9 299 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms