RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 CCDC87Q9NVE4 849 aa18.58■□□□□ 0.56
SNRNP200-205ENST00000480835 GNAI2P04899 355 aa18.57■□□□□ 0.56
SNRNP200-205ENST00000480835 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
SNRNP200-205ENST00000480835 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
SNRNP200-205ENST00000480835 UBTFL1P0CB47 393 aaPredicted RBP18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 ZBTB1Q9Y2K1 713 aa18.56■□□□□ 0.56
SNRNP200-205ENST00000480835 MYH14Q7Z406 1995 aaKnown RBP18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 CRKLP46109 303 aaKnown RBP18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 ITPK1Q13572 414 aa18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 TTLL7Q6ZT98 887 aa18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 MYD88Q99836 296 aa18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 TAF1LQ8IZX4 1826 aa18.55■□□□□ 0.56
SNRNP200-205ENST00000480835 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
SNRNP200-205ENST00000480835 HMGB2P26583 209 aaKnown RBP18.54■□□□□ 0.56
SNRNP200-205ENST00000480835 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
SNRNP200-205ENST00000480835 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
SNRNP200-205ENST00000480835 UTYO14607 1347 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 MAP3K15Q6ZN16 1313 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 HMMRO75330 724 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 EIF5P55010 431 aaKnown RBP18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 C9orf78Q9NZ63 289 aaPredicted RBP18.53■□□□□ 0.56
SNRNP200-205ENST00000480835 CWF19L2Q2TBE0 894 aaKnown RBP18.52■□□□□ 0.56
SNRNP200-205ENST00000480835 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
SNRNP200-205ENST00000480835 POTEAQ6S8J7 498 aa18.52■□□□□ 0.56
SNRNP200-205ENST00000480835 SMC5Q8IY18 1101 aa18.52■□□□□ 0.56
SNRNP200-205ENST00000480835 GCC1Q96CN9 775 aa18.52■□□□□ 0.56
SNRNP200-205ENST00000480835 ANKRD36CQ5JPF3 1778 aa18.52■□□□□ 0.55
SNRNP200-205ENST00000480835 NUP98P52948 1817 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 GRM8O00222 908 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 GCKRQ14397 625 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 HSP90AB3PQ58FF7 597 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
SNRNP200-205ENST00000480835 TCIRG1Q13488 830 aa18.5■□□□□ 0.55
SNRNP200-205ENST00000480835 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
SNRNP200-205ENST00000480835 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
SNRNP200-205ENST00000480835 A0A087WZG4 1122 aa18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 ATP8B2P98198 1209 aa18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 TRIM28Q13263 835 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 COL15A1P39059 1388 aa18.49■□□□□ 0.55
SNRNP200-205ENST00000480835 RGL2O15211 777 aa18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 TRIM37O94972 964 aa18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 NBPF7P0C2Y1 421 aaPredicted RBP18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 CWC25Q9NXE8 425 aaPredicted RBP18.48■□□□□ 0.55
SNRNP200-205ENST00000480835 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
SNRNP200-205ENST00000480835 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 RPS6KA4O75676 772 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 MTX1Q13505 466 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 ARXQ96QS3 562 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 DCTPP1Q9H773 170 aa18.46■□□□□ 0.55
SNRNP200-205ENST00000480835 PDZRN3Q9UPQ7 1066 aa18.45■□□□□ 0.54
SNRNP200-205ENST00000480835 H7C1W4 665 aa18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 PLSCR1O15162 318 aa18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 RGPD3A6NKT7 1758 aaPredicted RBP18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 RGPD4Q7Z3J3 1758 aa18.44■□□□□ 0.54
SNRNP200-205ENST00000480835 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
SNRNP200-205ENST00000480835 NUCB1Q02818 461 aa18.43■□□□□ 0.54
SNRNP200-205ENST00000480835 POLA2Q14181 598 aa18.43■□□□□ 0.54
SNRNP200-205ENST00000480835 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
SNRNP200-205ENST00000480835 ZNF652Q9Y2D9 606 aa18.43■□□□□ 0.54
SNRNP200-205ENST00000480835 SCN7AQ01118 1682 aa18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 CAMTA2O94983 1202 aa18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 CASP7P55210 303 aa18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 KCNQ4P56696 695 aa18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 HLFQ16534 295 aa18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
SNRNP200-205ENST00000480835 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
SNRNP200-205ENST00000480835 CLEC4GQ6UXB4 293 aa18.41■□□□□ 0.54
SNRNP200-205ENST00000480835 UBE3BQ7Z3V4 1068 aa18.41■□□□□ 0.54
SNRNP200-205ENST00000480835 PPP1R42Q7Z4L9 355 aa18.41■□□□□ 0.54
SNRNP200-205ENST00000480835 GNPATO15228 680 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 KAZALD1Q96I82 304 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 AK7Q96M32 723 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
SNRNP200-205ENST00000480835 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.54
SNRNP200-205ENST00000480835 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms