RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 STYK1Q6J9G0 422 aa13.15□□□□□ -0.3
TMEM40-207ENST00000480698 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
TMEM40-207ENST00000480698 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM40-207ENST00000480698 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
TMEM40-207ENST00000480698 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
TMEM40-207ENST00000480698 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM40-207ENST00000480698 DGKZQ13574 1117 aa13.14□□□□□ -0.31
TMEM40-207ENST00000480698 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
TMEM40-207ENST00000480698 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
TMEM40-207ENST00000480698 COL4A5P29400 1685 aa13.13□□□□□ -0.31
TMEM40-207ENST00000480698 AOC2O75106 756 aa13.13□□□□□ -0.31
TMEM40-207ENST00000480698 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
TMEM40-207ENST00000480698 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
TMEM40-207ENST00000480698 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
TMEM40-207ENST00000480698 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
TMEM40-207ENST00000480698 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
TMEM40-207ENST00000480698 MTHFSP49914 203 aa13.12□□□□□ -0.31
TMEM40-207ENST00000480698 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
TMEM40-207ENST00000480698 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMEM40-207ENST00000480698 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
TMEM40-207ENST00000480698 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
TMEM40-207ENST00000480698 GPC2Q8N158 579 aa13.12□□□□□ -0.31
TMEM40-207ENST00000480698 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
TMEM40-207ENST00000480698 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
TMEM40-207ENST00000480698 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
TMEM40-207ENST00000480698 SOX10P56693 466 aa13.1□□□□□ -0.31
TMEM40-207ENST00000480698 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
TMEM40-207ENST00000480698 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
TMEM40-207ENST00000480698 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
TMEM40-207ENST00000480698 SCNN1DP51172 638 aa13.09□□□□□ -0.31
TMEM40-207ENST00000480698 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
TMEM40-207ENST00000480698 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
TMEM40-207ENST00000480698 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
TMEM40-207ENST00000480698 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
TMEM40-207ENST00000480698 TRAF5O00463 557 aa13.07□□□□□ -0.32
TMEM40-207ENST00000480698 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
TMEM40-207ENST00000480698 BICDL1Q6ZP65 573 aa13.07□□□□□ -0.32
TMEM40-207ENST00000480698 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
TMEM40-207ENST00000480698 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
TMEM40-207ENST00000480698 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
TMEM40-207ENST00000480698 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
TMEM40-207ENST00000480698 AEBP1Q8IUX7 1158 aa13.06□□□□□ -0.32
TMEM40-207ENST00000480698 A0A087WZG4 1122 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 GRM1Q13255 1194 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 CIAPIN1Q6FI81 312 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 SAGE1Q9NXZ1 904 aa13.05□□□□□ -0.32
TMEM40-207ENST00000480698 HTTP42858 3142 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 BRCA2P51587 3418 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 EPS15P42566 896 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 PSMD1Q99460 953 aa13.04□□□□□ -0.32
TMEM40-207ENST00000480698 CAMTA2O94983 1202 aa13.03□□□□□ -0.32
TMEM40-207ENST00000480698 NOGQ13253 232 aa13.03□□□□□ -0.32
TMEM40-207ENST00000480698 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
TMEM40-207ENST00000480698 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
TMEM40-207ENST00000480698 NPR1P16066 1061 aa13.02□□□□□ -0.33
TMEM40-207ENST00000480698 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
TMEM40-207ENST00000480698 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
TMEM40-207ENST00000480698 ST5P78524 1137 aa13.02□□□□□ -0.33
TMEM40-207ENST00000480698 HABP4Q5JVS0 413 aaKnown RBP13.02□□□□□ -0.33
TMEM40-207ENST00000480698 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
TMEM40-207ENST00000480698 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
TMEM40-207ENST00000480698 FAM155AB1AL88 458 aaPredicted RBP13□□□□□ -0.33
TMEM40-207ENST00000480698 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
TMEM40-207ENST00000480698 CELF2O95319 508 aaKnown RBP13□□□□□ -0.33
TMEM40-207ENST00000480698 SETDB2Q96T68 719 aa13□□□□□ -0.33
TMEM40-207ENST00000480698 TBC1D2BQ9UPU7 963 aa13□□□□□ -0.33
TMEM40-207ENST00000480698 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
TMEM40-207ENST00000480698 STARD3NLO95772 234 aa12.99□□□□□ -0.33
TMEM40-207ENST00000480698 LMOD1P29536 600 aaPredicted RBP12.99□□□□□ -0.33
TMEM40-207ENST00000480698 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
TMEM40-207ENST00000480698 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
TMEM40-207ENST00000480698 FXR1P51114 621 aaKnown RBP eCLIP12.98□□□□□ -0.33
TMEM40-207ENST00000480698 ADARB2Q9NS39 739 aaKnown RBP12.98□□□□□ -0.33
TMEM40-207ENST00000480698 RGL2O15211 777 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
TMEM40-207ENST00000480698 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
TMEM40-207ENST00000480698 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
TMEM40-207ENST00000480698 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 CENPFP49454 3210 aa12.97□□□□□ -0.33
TMEM40-207ENST00000480698 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
TMEM40-207ENST00000480698 SULT6B1Q6IMI4 303 aa12.96□□□□□ -0.33
TMEM40-207ENST00000480698 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
TMEM40-207ENST00000480698 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
TMEM40-207ENST00000480698 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.33
TMEM40-207ENST00000480698 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
TMEM40-207ENST00000480698 IL13P35225 146 aa12.95□□□□□ -0.34
TMEM40-207ENST00000480698 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
TMEM40-207ENST00000480698 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
TMEM40-207ENST00000480698 RNF186Q9NXI6 227 aa12.95□□□□□ -0.34
TMEM40-207ENST00000480698 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms