RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 CUL4AQ13619 759 aa11.97□□□□□ -0.49
RERE-213ENST00000480342 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
RERE-213ENST00000480342 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
RERE-213ENST00000480342 OSBPL3Q9H4L5 887 aa11.96□□□□□ -0.49
RERE-213ENST00000480342 FIBPO43427 364 aa11.96□□□□□ -0.49
RERE-213ENST00000480342 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
RERE-213ENST00000480342 PHF14O94880 888 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 CCT4P50991 539 aaKnown RBP11.95□□□□□ -0.5
RERE-213ENST00000480342 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.54e-8■■■■□ 23.6
RERE-213ENST00000480342 CPA1P15085 419 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 LRRFIP2Q9Y608 721 aaKnown RBP11.95□□□□□ -0.5
RERE-213ENST00000480342 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
RERE-213ENST00000480342 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 PLCH1Q4KWH8 1693 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 INTS4Q96HW7 963 aaKnown RBP11.95□□□□□ -0.5
RERE-213ENST00000480342 STK31Q9BXU1 1019 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■■■□ 21.1
RERE-213ENST00000480342 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
RERE-213ENST00000480342 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
RERE-213ENST00000480342 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
RERE-213ENST00000480342 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
RERE-213ENST00000480342 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
RERE-213ENST00000480342 MTHFSDQ2M296 383 aaKnown RBP11.94□□□□□ -0.5
RERE-213ENST00000480342 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
RERE-213ENST00000480342 SPC24Q8NBT2 197 aa11.94□□□□□ -0.5
RERE-213ENST00000480342 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
RERE-213ENST00000480342 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 MRC1P22897 1456 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 CBX1P83916 185 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 FLIIQ13045 1269 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 TCHHQ07283 1943 aa11.93□□□□□ -0.5
RERE-213ENST00000480342 ANAPC15P60006 121 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 ZNF335Q9H4Z2 1342 aaPredicted RBP11.92□□□□□ -0.5
RERE-213ENST00000480342 HOXB7P09629 217 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
RERE-213ENST00000480342 MTERF4Q7Z6M4 381 aaKnown RBP11.92□□□□□ -0.5
RERE-213ENST00000480342 ROBO1Q9Y6N7 1651 aa11.92□□□□□ -0.5
RERE-213ENST00000480342 ERBB3P21860 1342 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 SALL3Q9BXA9 1300 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
RERE-213ENST00000480342 SYT1P21579 422 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 AK2P54819 239 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 ATP8B2P98198 1209 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
RERE-213ENST00000480342 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
RERE-213ENST00000480342 STX6O43752 255 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 GNAI3P08754 354 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
RERE-213ENST00000480342 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
RERE-213ENST00000480342 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 RPAP1Q9BWH6 1393 aaPredicted RBP11.9□□□□□ -0.5
RERE-213ENST00000480342 HSPA4P34932 840 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
RERE-213ENST00000480342 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
RERE-213ENST00000480342 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
RERE-213ENST00000480342 KDM4AO75164 1064 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 ANKRD24Q8TF21 1146 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
RERE-213ENST00000480342 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
RERE-213ENST00000480342 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 AP5Z1O43299 807 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 LARGE1O95461 756 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
RERE-213ENST00000480342 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
RERE-213ENST00000480342 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 RUFY3Q7L099 469 aa11.89□□□□□ -0.51
RERE-213ENST00000480342 UBE2HP62256 183 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 KIF3AQ9Y496 699 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 CAMK4Q16566 473 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 PYCARDQ9ULZ3 195 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 F13A1P00488 732 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 SMAP1Q8IYB5 467 aaPredicted RBP11.88□□□□□ -0.51
RERE-213ENST00000480342 PRIMPOLQ96LW4 560 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
RERE-213ENST00000480342 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
RERE-213ENST00000480342 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
RERE-213ENST00000480342 GJB2P29033 226 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 HMGN5P82970 282 aaKnown RBP11.87□□□□□ -0.51
RERE-213ENST00000480342 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 STAP2Q9UGK3 403 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
RERE-213ENST00000480342 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms