RNA–Protein interactions for RNA: ENST00000480283.5

ATRX-206, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 10,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-206ENST00000480283 HDAC1Q13547 482 aaPredicted RBP4.39□□□□□ -1.71
ATRX-206ENST00000480283 TFIP11Q9UBB9 837 aaKnown RBP4.39□□□□□ -1.71
ATRX-206ENST00000480283 MCM4P33991 863 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 NPHP3Q7Z494 1330 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ZNF521Q96K83 1311 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 UBAP1LF5GYI3 381 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 PLEKHM2Q8IWE5 1019 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 FAM89AQ96GI7 184 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 DCTPP1Q9H773 170 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 TTLL7Q6ZT98 887 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ZNF496Q96IT1 587 aaPredicted RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 CAMSAP1Q5T5Y3 1602 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 STARD3NLO95772 234 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 CCT2P78371 535 aaKnown RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 KSR2Q6VAB6 950 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 CCDC144CPQ8IYA2 1237 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ZGPATQ8N5A5 531 aaKnown RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 TBC1D32Q96NH3 1257 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 BICC1Q9H694 974 aaKnown RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 GSPT1P15170 499 aaKnown RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 TFCP2Q12800 502 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 VGLL3A8MV65 326 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 PRIM1P49642 420 aaKnown RBP4.38□□□□□ -1.71
ATRX-206ENST00000480283 JAG2Q9Y219 1238 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 LMTK2Q8IWU2 1503 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 DDX11L8A8MPP1 907 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 RNF20Q5VTR2 975 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ZNF790Q6PG37 636 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ZFYVE9O95405 1425 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 ARHGAP45Q92619 1136 aa4.38□□□□□ -1.71
ATRX-206ENST00000480283 MED14O60244 1454 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 MLH3Q9UHC1 1453 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 DHX16O60231 1041 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 TRDNQ13061 729 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 ERC1Q8IUD2 1116 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SIRT2Q8IXJ6 389 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SIRT1Q96EB6 747 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 RAI14Q9P0K7 980 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 MSH6P52701 1360 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 NUCB2P80303 420 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SYNE3Q6ZMZ3 975 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 NUP133Q8WUM0 1156 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 MPHOSPH8Q99549 860 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 CYP46A1Q9Y6A2 500 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 CPLX1O14810 134 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SLFNL1Q499Z3 407 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 TMX4Q9H1E5 349 aaPredicted RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 SPHKAPQ2M3C7 1700 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 ABCC6O95255 1503 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 GRM8O00222 908 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 BLOC1S2Q6QNY1 142 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 SEC62Q99442 399 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 DBNDD2Q9BQY9 259 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 MINDY4BA8MYZ0 360 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 GLRX3O76003 335 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 PHKG2P15735 406 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 ATP6V1AP38606 617 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 FAM98CQ17RN3 349 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 FAM173BQ6P4H8 233 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 DZIP3Q86Y13 1208 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 MAP3K5Q99683 1374 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 RGS12O14924 1447 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 IL2RBP14784 551 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 RABEP1Q15276 862 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 EDC4Q6P2E9 1401 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 RALYLQ86SE5 291 aaKnown RBP4.37□□□□□ -1.71
ATRX-206ENST00000480283 ESYT1Q9BSJ8 1104 aa4.37□□□□□ -1.71
ATRX-206ENST00000480283 DDB1Q16531 1140 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 DDX21Q9NR30 783 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATRX-206ENST00000480283 HYPKQ9NX55 129 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 SLAIN2Q9P270 581 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 PIK3R4Q99570 1358 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 RAB11FIP3O75154 756 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 NMIQ13287 307 aaPredicted RBP4.36□□□□□ -1.71
ATRX-206ENST00000480283 ECHDC1Q9NTX5 307 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 IFT172Q9UG01 1749 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 EFCAB6Q5THR3 1501 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 UNC5CLQ8IV45 518 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 TMX3Q96JJ7 454 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 PANK2Q9BZ23 570 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 AGLP35573 1532 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 CLTCL1P53675 1640 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 HCLS1P14317 486 aaPredicted RBP4.36□□□□□ -1.71
ATRX-206ENST00000480283 ISM2Q6H9L7 571 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 SPC24Q8NBT2 197 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 RASSF8Q8NHQ8 419 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 CWC25Q9NXE8 425 aaPredicted RBP4.36□□□□□ -1.71
ATRX-206ENST00000480283 E9PCH4 1651 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 BMP2KLQ5H9B9 411 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 LARP1BQ659C4 914 aaKnown RBP4.36□□□□□ -1.71
ATRX-206ENST00000480283 FAM227BQ96M60 508 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 TLR7Q9NYK1 1049 aaKnown RBP4.36□□□□□ -1.71
ATRX-206ENST00000480283 ASAP1Q9ULH1 1129 aa4.36□□□□□ -1.71
ATRX-206ENST00000480283 KNDC1Q76NI1 1749 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms