RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 F6X3S4 739 aa21.36■■□□□ 1.01
SCAMP3-207ENST00000480219 COL15A1P39059 1388 aa21.36■■□□□ 1.01
SCAMP3-207ENST00000480219 MAP3K15Q6ZN16 1313 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 ERVV-1B6SEH8 477 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 DDX19BQ9UMR2 479 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 COG6Q9Y2V7 657 aa21.35■■□□□ 1.01
SCAMP3-207ENST00000480219 BCORQ6W2J9 1755 aa21.34■■□□□ 1.01
SCAMP3-207ENST00000480219 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
SCAMP3-207ENST00000480219 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
SCAMP3-207ENST00000480219 FKBP8Q14318 412 aa21.34■■□□□ 1.01
SCAMP3-207ENST00000480219 METTL22Q9BUU2 404 aaPredicted RBP21.34■■□□□ 1.01
SCAMP3-207ENST00000480219 A0A087WZG4 1122 aa21.33■■□□□ 1.01
SCAMP3-207ENST00000480219 ADRA2BP18089 450 aa21.33■■□□□ 1.01
SCAMP3-207ENST00000480219 BAG6P46379 1132 aa21.33■■□□□ 1.01
SCAMP3-207ENST00000480219 RIC3Q7Z5B4 369 aa21.33■■□□□ 1.01
SCAMP3-207ENST00000480219 EXOC6Q8TAG9 804 aa21.33■■□□□ 1.01
SCAMP3-207ENST00000480219 SCN7AQ01118 1682 aa21.32■■□□□ 1
SCAMP3-207ENST00000480219 ALDH1L1O75891 902 aa21.32■■□□□ 1
SCAMP3-207ENST00000480219 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
SCAMP3-207ENST00000480219 LINS1Q8NG48 757 aa21.32■■□□□ 1
SCAMP3-207ENST00000480219 AKT1S1Q96B36 256 aa21.32■■□□□ 1
SCAMP3-207ENST00000480219 ZBTB7BO15156 539 aaPredicted RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 TRIM28Q13263 835 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 SF3B2Q13435 895 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 GIGYF2Q6Y7W6 1299 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 DZIP3Q86Y13 1208 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 CHMP4BQ9H444 224 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 RTCBQ9Y3I0 505 aaKnown RBP21.31■■□□□ 1
SCAMP3-207ENST00000480219 C4AP0C0L4 1744 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 GNPATO15228 680 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 CAMTA2O94983 1202 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 SSFA2P28290 1259 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 ITPRIPQ8IWB1 547 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 AK7Q96M32 723 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
SCAMP3-207ENST00000480219 ANKRD36CQ5JPF3 1778 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 IGKV5-2P06315 115 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 EN1Q05925 392 aaPredicted RBP21.29■■□□□ 1
SCAMP3-207ENST00000480219 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
SCAMP3-207ENST00000480219 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
SCAMP3-207ENST00000480219 AMIGO3Q86WK7 504 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 ZBTB40Q9NUA8 1239 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
SCAMP3-207ENST00000480219 NEXNQ0ZGT2 675 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 TCIRG1Q13488 830 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 HSP90AB3PQ58FF7 597 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 NARFQ9UHQ1 456 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 UTYO14607 1347 aa21.28■■□□□ 1
SCAMP3-207ENST00000480219 NUP98P52948 1817 aa21.27■■□□□ 1
SCAMP3-207ENST00000480219 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
SCAMP3-207ENST00000480219 ZNF827Q17R98 1081 aa21.26■□□□□ 0.99
SCAMP3-207ENST00000480219 MYD88Q99836 296 aa21.26■□□□□ 0.99
SCAMP3-207ENST00000480219 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
SCAMP3-207ENST00000480219 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
SCAMP3-207ENST00000480219 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
SCAMP3-207ENST00000480219 HLFQ16534 295 aa21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 CCDC191Q8NCU4 936 aa21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 ARHGEF1Q92888 912 aaKnown RBP21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 UPF1Q92900 1129 aaKnown RBP eCLIP21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 USP44Q9H0E7 712 aa21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 USP42Q9H9J4 1324 aaKnown RBP21.25■□□□□ 0.99
SCAMP3-207ENST00000480219 TRAPPC3LQ5T215 181 aa21.24■□□□□ 0.99
SCAMP3-207ENST00000480219 DEFB132Q7Z7B7 95 aa21.24■□□□□ 0.99
SCAMP3-207ENST00000480219 ZNF34Q8IZ26 560 aa21.24■□□□□ 0.99
SCAMP3-207ENST00000480219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 GNAI3P08754 354 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 GCKRQ14397 625 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 CWF19L2Q2TBE0 894 aaKnown RBP21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 MEIS3Q99687 375 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 ZNF652Q9Y2D9 606 aa21.23■□□□□ 0.99
SCAMP3-207ENST00000480219 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
SCAMP3-207ENST00000480219 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
SCAMP3-207ENST00000480219 GRM8O00222 908 aa21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 SLC15A2Q16348 729 aa21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 NLRP10Q86W26 655 aa21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 ANO8Q9HCE9 1232 aaPredicted RBP21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 CWC25Q9NXE8 425 aaPredicted RBP21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 COL24A1Q17RW2 1714 aa21.2■□□□□ 0.98
SCAMP3-207ENST00000480219 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 H7C1W4 665 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 RFC4P35249 363 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 CASP7P55210 303 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 SMIM5Q71RC9 77 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 UBN2Q6ZU65 1347 aa21.19■□□□□ 0.98
SCAMP3-207ENST00000480219 ZPR1O75312 459 aa21.18■□□□□ 0.98
SCAMP3-207ENST00000480219 PARP10Q53GL7 1025 aa21.18■□□□□ 0.98
SCAMP3-207ENST00000480219 USPL1Q5W0Q7 1092 aa21.18■□□□□ 0.98
SCAMP3-207ENST00000480219 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
SCAMP3-207ENST00000480219 SRP68Q9UHB9 627 aaKnown RBP21.18■□□□□ 0.98
SCAMP3-207ENST00000480219 PNPLA7Q6ZV29 1317 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms