RNA–Protein interactions for RNA: ENST00000479901.5

AGAP3-216, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 5 BASIC

Gene AGAP3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-216	ENST00000479901	FAM98C	Q17RN3	349 aa	Known RBP	32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	PROSER3	Q2NL68	480 aa		32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	RHPN1	Q8TCX5	695 aa		32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	ESYT1	Q9BSJ8	1104 aa		32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	HSP90AA1	P07900	732 aa	Known RBP	32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	ZNF790	Q6PG37	636 aa		32.57	■■■□□ 2.8
AGAP3-216	ENST00000479901	RAB3GAP1	Q15042	981 aa		32.56	■■■□□ 2.8
AGAP3-216	ENST00000479901	WDR17	Q8IZU2	1322 aa		32.55	■■■□□ 2.8
AGAP3-216	ENST00000479901	DDX11L8	A8MPP1	907 aa		32.55	■■■□□ 2.8
AGAP3-216	ENST00000479901	C5	P01031	1676 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	CSB-PGBD3	P0DP91	1061 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	CHML	P26374	656 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	TSHZ3	Q63HK5	1081 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	TOM1L2	Q6ZVM7	507 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	LINS1	Q8NG48	757 aa		32.54	■■■□□ 2.8
AGAP3-216	ENST00000479901	EPB41L2	O43491	1005 aa	Known RBP	32.53	■■■□□ 2.8
AGAP3-216	ENST00000479901	UTY	O14607	1347 aa		32.53	■■■□□ 2.8
AGAP3-216	ENST00000479901	PRAMEF22	A3QJZ6	481 aa		32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	ST18	O60284	1047 aa		32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	PDIA6	Q15084	440 aa		32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	DCAF5	Q96JK2	942 aa		32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	IL1RAPL2	Q9NP60	686 aa		32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.52	■■■□□ 2.8
AGAP3-216	ENST00000479901	USP42	Q9H9J4	1324 aa	Known RBP	32.51	■■■□□ 2.79
AGAP3-216	ENST00000479901	TRIM6-TRIM34	B2RNG4	842 aa		32.5	■■■□□ 2.79
AGAP3-216	ENST00000479901	ONECUT3	O60422	494 aa	Predicted RBP	32.5	■■■□□ 2.79
AGAP3-216	ENST00000479901	PARP4	Q9UKK3	1724 aa	Known RBP	32.5	■■■□□ 2.79
AGAP3-216	ENST00000479901	TNPO1	Q92973	898 aa	Known RBP	32.5	■■■□□ 2.79
AGAP3-216	ENST00000479901	SEPT12	Q8IYM1	358 aa		32.49	■■■□□ 2.79
AGAP3-216	ENST00000479901	RILPL2	Q969X0	211 aa		32.49	■■■□□ 2.79
AGAP3-216	ENST00000479901	GBP4	Q96PP9	640 aa		32.49	■■■□□ 2.79
AGAP3-216	ENST00000479901	AK9	Q5TCS8	1911 aa		32.48	■■■□□ 2.79
AGAP3-216	ENST00000479901	PTMS	P20962	102 aa		32.48	■■■□□ 2.79
AGAP3-216	ENST00000479901	MCC	P23508	829 aa		32.48	■■■□□ 2.79
AGAP3-216	ENST00000479901	IL17RA	Q96F46	866 aa		32.48	■■■□□ 2.79
AGAP3-216	ENST00000479901	ANAPC15	P60006	121 aa		32.47	■■■□□ 2.79
AGAP3-216	ENST00000479901	NUTM1	Q86Y26	1132 aa		32.47	■■■□□ 2.79
AGAP3-216	ENST00000479901	NFATC2IP	Q8NCF5	419 aa		32.47	■■■□□ 2.79
AGAP3-216	ENST00000479901	PI4K2B	Q8TCG2	481 aa		32.47	■■■□□ 2.79
AGAP3-216	ENST00000479901		A0A0G2JS52	829 aa		32.46	■■■□□ 2.79
AGAP3-216	ENST00000479901	SLC39A6	Q13433	755 aa		32.46	■■■□□ 2.79
AGAP3-216	ENST00000479901	ERC1	Q8IUD2	1116 aa		32.46	■■■□□ 2.79
AGAP3-216	ENST00000479901	IL27	Q8NEV9	243 aa		32.46	■■■□□ 2.79
AGAP3-216	ENST00000479901	GRM8	O00222	908 aa		32.45	■■■□□ 2.79
AGAP3-216	ENST00000479901	TTC41P	Q6P2S7	1318 aa		32.45	■■■□□ 2.79
AGAP3-216	ENST00000479901	CYP27B1	O15528	508 aa		32.44	■■■□□ 2.78
AGAP3-216	ENST00000479901	CARD10	Q9BWT7	1032 aa		32.44	■■■□□ 2.78
AGAP3-216	ENST00000479901	CLEC17A	Q6ZS10	378 aa		32.44	■■■□□ 2.78
AGAP3-216	ENST00000479901	TRAK2	O60296	914 aa		32.43	■■■□□ 2.78
AGAP3-216	ENST00000479901	CWF19L2	Q2TBE0	894 aa	Known RBP	32.43	■■■□□ 2.78
AGAP3-216	ENST00000479901	CWC22	Q9HCG8	908 aa	Known RBP	32.43	■■■□□ 2.78
AGAP3-216	ENST00000479901	SNRPA1	P09661	255 aa	Known RBP	32.42	■■■□□ 2.78
AGAP3-216	ENST00000479901	BRWD3	Q6RI45	1802 aa		32.42	■■■□□ 2.78
AGAP3-216	ENST00000479901	MCM2	P49736	904 aa		32.41	■■■□□ 2.78
AGAP3-216	ENST00000479901	BARGIN	Q6ZT62	677 aa		32.41	■■■□□ 2.78
AGAP3-216	ENST00000479901	TTC5	Q8N0Z6	440 aa		32.41	■■■□□ 2.78
AGAP3-216	ENST00000479901	ZNF496	Q96IT1	587 aa	Predicted RBP	32.41	■■■□□ 2.78
AGAP3-216	ENST00000479901	FOXD4L1	Q9NU39	408 aa		32.41	■■■□□ 2.78
AGAP3-216	ENST00000479901	OS9	Q13438	667 aa	Predicted RBP	32.4	■■■□□ 2.78
AGAP3-216	ENST00000479901	RIC3	Q7Z5B4	369 aa		32.4	■■■□□ 2.78
AGAP3-216	ENST00000479901	FMNL2	Q96PY5	1086 aa		32.4	■■■□□ 2.78
AGAP3-216	ENST00000479901	THSD7A	Q9UPZ6	1657 aa		32.4	■■■□□ 2.78
AGAP3-216	ENST00000479901	CNTROB	Q8N137	903 aa		32.4	■■■□□ 2.78
AGAP3-216	ENST00000479901	NEXN	Q0ZGT2	675 aa		32.39	■■■□□ 2.78
AGAP3-216	ENST00000479901	CLASRP	Q8N2M8	674 aa	Known RBP	32.39	■■■□□ 2.78
AGAP3-216	ENST00000479901	LAMB4	A4D0S4	1761 aa		32.38	■■■□□ 2.77
AGAP3-216	ENST00000479901	NUCB2	P80303	420 aa		32.38	■■■□□ 2.77
AGAP3-216	ENST00000479901	AIMP1	Q12904	312 aa	Known RBP	32.38	■■■□□ 2.77
AGAP3-216	ENST00000479901	SUCLG2	Q96I99	432 aa		32.38	■■■□□ 2.77
AGAP3-216	ENST00000479901	THRAP3	Q9Y2W1	955 aa	Known RBP	32.38	■■■□□ 2.77
AGAP3-216	ENST00000479901	GLRX3	O76003	335 aa	Known RBP	32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	IGKV5-2	P06315	115 aa		32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	FAM182B	Q5T319	152 aa		32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	ANO2	Q9NQ90	1003 aa		32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	L1TD1	Q5T7N2	865 aa	Known RBP	32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	XAGE3	Q8WTP9	111 aa		32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	METTL22	Q9BUU2	404 aa	Predicted RBP	32.37	■■■□□ 2.77
AGAP3-216	ENST00000479901	LRP10	Q7Z4F1	713 aa		32.36	■■■□□ 2.77
AGAP3-216	ENST00000479901	KAZALD1	Q96I82	304 aa		32.36	■■■□□ 2.77
AGAP3-216	ENST00000479901	CABP4	P57796	275 aa		32.35	■■■□□ 2.77
AGAP3-216	ENST00000479901	NEURL1B	A8MQ27	555 aa		32.35	■■■□□ 2.77
AGAP3-216	ENST00000479901	SKOR2	Q2VWA4	1001 aa	Predicted RBP	32.35	■■■□□ 2.77
AGAP3-216	ENST00000479901	GPATCH3	Q96I76	525 aa		32.35	■■■□□ 2.77
AGAP3-216	ENST00000479901	COPS6	Q7L5N1	327 aa		32.34	■■■□□ 2.77
AGAP3-216	ENST00000479901	MYL6B	P14649	208 aa		32.33	■■■□□ 2.77
AGAP3-216	ENST00000479901	BICC1	Q9H694	974 aa	Known RBP	32.33	■■■□□ 2.77
AGAP3-216	ENST00000479901	SSFA2	P28290	1259 aa		32.32	■■■□□ 2.76
AGAP3-216	ENST00000479901	GCKR	Q14397	625 aa		32.32	■■■□□ 2.76
AGAP3-216	ENST00000479901	ECHDC1	Q9NTX5	307 aa		32.32	■■■□□ 2.76
AGAP3-216	ENST00000479901	DISP2	A7MBM2	1401 aa		32.32	■■■□□ 2.76
AGAP3-216	ENST00000479901	COL15A1	P39059	1388 aa		32.32	■■■□□ 2.76
AGAP3-216	ENST00000479901	SGSM2	O43147	1006 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	CYP2E1	P05181	493 aa	Predicted RBP	32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	NEK4	P51957	841 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	USP16	Q9Y5T5	823 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	ERBB4	Q15303	1308 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	PCDH11X	Q9BZA7	1347 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	PCDH11Y	Q9BZA8	1340 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	ANKRD13D	Q6ZTN6	518 aa		32.31	■■■□□ 2.76
AGAP3-216	ENST00000479901	KRT27	Q7Z3Y8	459 aa		32.31	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms