RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 H0YIN7 160 aa11.67□□□□□ -0.54
DDX56-211ENST00000479602 CLEC4GQ6UXB4 293 aa11.67□□□□□ -0.54
DDX56-211ENST00000479602 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
DDX56-211ENST00000479602 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
DDX56-211ENST00000479602 SBF1O95248 1867 aa11.67□□□□□ -0.54
DDX56-211ENST00000479602 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 AFDNP55196 1824 aaKnown RBP11.66□□□□□ -0.54
DDX56-211ENST00000479602 PRAMEF22A3QJZ6 481 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 RASSF7Q02833 373 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
DDX56-211ENST00000479602 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
DDX56-211ENST00000479602 SRGNP10124 158 aa11.65□□□□□ -0.54
DDX56-211ENST00000479602 PDE6BP35913 854 aa11.65□□□□□ -0.54
DDX56-211ENST00000479602 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
DDX56-211ENST00000479602 RTF1Q92541 710 aaKnown RBP11.65□□□□□ -0.54
DDX56-211ENST00000479602 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
DDX56-211ENST00000479602 APAF1O14727 1248 aa11.64□□□□□ -0.55
DDX56-211ENST00000479602 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
DDX56-211ENST00000479602 RIPK4P57078 832 aa11.64□□□□□ -0.55
DDX56-211ENST00000479602 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
DDX56-211ENST00000479602 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
DDX56-211ENST00000479602 HOXB7P09629 217 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
DDX56-211ENST00000479602 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 MCM10Q7L590 875 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 KLRG1Q96E93 195 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
DDX56-211ENST00000479602 CHL1O00533 1208 aa11.62□□□□□ -0.55
DDX56-211ENST00000479602 HTRA3P83110 453 aa11.62□□□□□ -0.55
DDX56-211ENST00000479602 DCTN1Q14203 1278 aa11.62□□□□□ -0.55
DDX56-211ENST00000479602 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
DDX56-211ENST00000479602 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
DDX56-211ENST00000479602 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
DDX56-211ENST00000479602 CCDC24Q8N4L8 307 aa11.62□□□□□ -0.55
DDX56-211ENST00000479602 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 C21orf2O43822 256 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 CCDC146Q8IYE0 955 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
DDX56-211ENST00000479602 ANKRD31Q8N7Z5 1873 aa11.6□□□□□ -0.55
DDX56-211ENST00000479602 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
DDX56-211ENST00000479602 PIP4K2AP48426 406 aaPredicted RBP11.6□□□□□ -0.55
DDX56-211ENST00000479602 GNAI1P63096 354 aa11.6□□□□□ -0.55
DDX56-211ENST00000479602 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
DDX56-211ENST00000479602 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX56-211ENST00000479602 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
DDX56-211ENST00000479602 HLFQ16534 295 aa11.59□□□□□ -0.55
DDX56-211ENST00000479602 PRPF40BQ6NWY9 871 aaKnown RBP11.59□□□□□ -0.55
DDX56-211ENST00000479602 C16orf71Q8IYS4 520 aaPredicted RBP11.59□□□□□ -0.55
DDX56-211ENST00000479602 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
DDX56-211ENST00000479602 ERBB4Q15303 1308 aa11.59□□□□□ -0.55
DDX56-211ENST00000479602 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
DDX56-211ENST00000479602 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 TPTE2Q6XPS3 522 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 SNED1Q8TER0 1413 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
DDX56-211ENST00000479602 SCN7AQ01118 1682 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
DDX56-211ENST00000479602 NPR1P16066 1061 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 TRMT2AQ8IZ69 625 aaKnown RBP11.57□□□□□ -0.56
DDX56-211ENST00000479602 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
DDX56-211ENST00000479602 TAOK3Q9H2K8 898 aa11.57□□□□□ -0.56
DDX56-211ENST00000479602 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
DDX56-211ENST00000479602 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
DDX56-211ENST00000479602 ST5P78524 1137 aa11.56□□□□□ -0.56
DDX56-211ENST00000479602 FER1L6Q2WGJ9 1857 aa11.56□□□□□ -0.56
DDX56-211ENST00000479602 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
DDX56-211ENST00000479602 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
DDX56-211ENST00000479602 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
DDX56-211ENST00000479602 E9PSI1 815 aa11.55□□□□□ -0.56
DDX56-211ENST00000479602 DDNO94850 711 aaPredicted RBP11.55□□□□□ -0.56
DDX56-211ENST00000479602 HOXA10P31260 410 aaPredicted RBP11.55□□□□□ -0.56
DDX56-211ENST00000479602 PDIA6Q15084 440 aa11.55□□□□□ -0.56
DDX56-211ENST00000479602 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
DDX56-211ENST00000479602 ZNF652Q9Y2D9 606 aa11.55□□□□□ -0.56
DDX56-211ENST00000479602 FZD9O00144 591 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 COL13A1Q5TAT6 717 aaPredicted RBP11.54□□□□□ -0.56
DDX56-211ENST00000479602 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
DDX56-211ENST00000479602 ZNF34Q8IZ26 560 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 MYH16Q9H6N6 1097 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
DDX56-211ENST00000479602 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
DDX56-211ENST00000479602 TNRC6CQ9HCJ0 1690 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms