RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
ABCF1-206ENST00000479542 ZNF652Q9Y2D9 606 aa17.78■□□□□ 0.44
ABCF1-206ENST00000479542 KCNQ3O43525 872 aa17.77■□□□□ 0.44
ABCF1-206ENST00000479542 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.44
ABCF1-206ENST00000479542 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
ABCF1-206ENST00000479542 PCNTO95613 3336 aa17.77■□□□□ 0.43
ABCF1-206ENST00000479542 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
ABCF1-206ENST00000479542 HTRA3P83110 453 aa17.76■□□□□ 0.43
ABCF1-206ENST00000479542 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
ABCF1-206ENST00000479542 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
ABCF1-206ENST00000479542 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
ABCF1-206ENST00000479542 BCORQ6W2J9 1755 aa17.75■□□□□ 0.43
ABCF1-206ENST00000479542 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
ABCF1-206ENST00000479542 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
ABCF1-206ENST00000479542 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.43
ABCF1-206ENST00000479542 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
ABCF1-206ENST00000479542 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
ABCF1-206ENST00000479542 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
ABCF1-206ENST00000479542 SLX4Q8IY92 1834 aa17.73■□□□□ 0.43
ABCF1-206ENST00000479542 NPHP1O15259 732 aa17.73■□□□□ 0.43
ABCF1-206ENST00000479542 NPR1P16066 1061 aa17.73■□□□□ 0.43
ABCF1-206ENST00000479542 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
ABCF1-206ENST00000479542 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
ABCF1-206ENST00000479542 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
ABCF1-206ENST00000479542 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
ABCF1-206ENST00000479542 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 ALDH1B1P30837 517 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
ABCF1-206ENST00000479542 MCM10Q7L590 875 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
ABCF1-206ENST00000479542 ERVV-1B6SEH8 477 aa17.7■□□□□ 0.42
ABCF1-206ENST00000479542 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
ABCF1-206ENST00000479542 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
ABCF1-206ENST00000479542 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
ABCF1-206ENST00000479542 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
ABCF1-206ENST00000479542 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
ABCF1-206ENST00000479542 NIP7Q9Y221 180 aaKnown RBP eCLIP17.69■□□□□ 0.42
ABCF1-206ENST00000479542 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
ABCF1-206ENST00000479542 CC2D2BQ6DHV5 1058 aa17.68■□□□□ 0.42
ABCF1-206ENST00000479542 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
ABCF1-206ENST00000479542 SCN4AP35499 1836 aa17.68■□□□□ 0.42
ABCF1-206ENST00000479542 CRY2Q49AN0 593 aa17.67■□□□□ 0.42
ABCF1-206ENST00000479542 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
ABCF1-206ENST00000479542 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
ABCF1-206ENST00000479542 NEFMP07197 916 aa17.66■□□□□ 0.42
ABCF1-206ENST00000479542 PSMD1Q99460 953 aa17.66■□□□□ 0.42
ABCF1-206ENST00000479542 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
ABCF1-206ENST00000479542 RIC1Q4ADV7 1423 aa17.65■□□□□ 0.42
ABCF1-206ENST00000479542 FZD9O00144 591 aa17.65■□□□□ 0.42
ABCF1-206ENST00000479542 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
ABCF1-206ENST00000479542 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
ABCF1-206ENST00000479542 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
ABCF1-206ENST00000479542 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
ABCF1-206ENST00000479542 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
ABCF1-206ENST00000479542 PASKQ96RG2 1323 aa17.65■□□□□ 0.42
ABCF1-206ENST00000479542 HSPA1AP0DMV8 641 aaKnown RBP17.64■□□□□ 0.41
ABCF1-206ENST00000479542 HSPA1BP0DMV9 641 aaKnown RBP17.64■□□□□ 0.41
ABCF1-206ENST00000479542 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
ABCF1-206ENST00000479542 HLFQ16534 295 aa17.64■□□□□ 0.41
ABCF1-206ENST00000479542 PLEKHF1Q96S99 279 aa17.64■□□□□ 0.41
ABCF1-206ENST00000479542 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
ABCF1-206ENST00000479542 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
ABCF1-206ENST00000479542 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
ABCF1-206ENST00000479542 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
ABCF1-206ENST00000479542 PNMA8AQ86V59 439 aaPredicted RBP17.62■□□□□ 0.41
ABCF1-206ENST00000479542 TNS4Q8IZW8 715 aa17.62■□□□□ 0.41
ABCF1-206ENST00000479542 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
ABCF1-206ENST00000479542 POTEIP0CG38 1075 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 POTEJP0CG39 1038 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
ABCF1-206ENST00000479542 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
ABCF1-206ENST00000479542 GPC2Q8N158 579 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
ABCF1-206ENST00000479542 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
ABCF1-206ENST00000479542 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
ABCF1-206ENST00000479542 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
ABCF1-206ENST00000479542 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
ABCF1-206ENST00000479542 ZNF277Q9NRM2 450 aaPredicted RBP17.6■□□□□ 0.41
ABCF1-206ENST00000479542 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
ABCF1-206ENST00000479542 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
ABCF1-206ENST00000479542 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
ABCF1-206ENST00000479542 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
ABCF1-206ENST00000479542 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
ABCF1-206ENST00000479542 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.4
ABCF1-206ENST00000479542 EPHX2P34913 555 aa17.58■□□□□ 0.4
ABCF1-206ENST00000479542 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
ABCF1-206ENST00000479542 KIF6Q6ZMV9 814 aa17.58■□□□□ 0.4
ABCF1-206ENST00000479542 ZNF541Q9H0D2 1346 aa17.57■□□□□ 0.4
ABCF1-206ENST00000479542 NUP98P52948 1817 aa17.57■□□□□ 0.4
ABCF1-206ENST00000479542 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
ABCF1-206ENST00000479542 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
ABCF1-206ENST00000479542 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
ABCF1-206ENST00000479542 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms