RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 SETDB2Q96T68 719 aa11.52□□□□□ -0.57
ITSN1-228ENST00000479424 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
ITSN1-228ENST00000479424 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
ITSN1-228ENST00000479424 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
ITSN1-228ENST00000479424 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
ITSN1-228ENST00000479424 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 SCN4AP35499 1836 aa11.51□□□□□ -0.57
ITSN1-228ENST00000479424 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
ITSN1-228ENST00000479424 STYK1Q6J9G0 422 aa11.5□□□□□ -0.57
ITSN1-228ENST00000479424 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
ITSN1-228ENST00000479424 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
ITSN1-228ENST00000479424 SNRPA1P09661 255 aaKnown RBP11.49□□□□□ -0.57
ITSN1-228ENST00000479424 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
ITSN1-228ENST00000479424 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
ITSN1-228ENST00000479424 CLEC4GQ6UXB4 293 aa11.49□□□□□ -0.57
ITSN1-228ENST00000479424 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
ITSN1-228ENST00000479424 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
ITSN1-228ENST00000479424 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
ITSN1-228ENST00000479424 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
ITSN1-228ENST00000479424 DDNO94850 711 aaPredicted RBP11.48□□□□□ -0.57
ITSN1-228ENST00000479424 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
ITSN1-228ENST00000479424 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
ITSN1-228ENST00000479424 ST5P78524 1137 aa11.48□□□□□ -0.57
ITSN1-228ENST00000479424 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
ITSN1-228ENST00000479424 HTATSF1O43719 755 aaKnown RBP11.47□□□□□ -0.57
ITSN1-228ENST00000479424 HLFQ16534 295 aa11.47□□□□□ -0.57
ITSN1-228ENST00000479424 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
ITSN1-228ENST00000479424 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
ITSN1-228ENST00000479424 MIS18AQ9NYP9 233 aa11.47□□□□□ -0.57
ITSN1-228ENST00000479424 NUDCQ9Y266 331 aa11.47□□□□□ -0.57
ITSN1-228ENST00000479424 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
ITSN1-228ENST00000479424 SNED1Q8TER0 1413 aa11.46□□□□□ -0.57
ITSN1-228ENST00000479424 RGL2O15211 777 aa11.46□□□□□ -0.57
ITSN1-228ENST00000479424 RTF1Q92541 710 aaKnown RBP11.46□□□□□ -0.57
ITSN1-228ENST00000479424 NIP7Q9Y221 180 aaKnown RBP eCLIP11.46□□□□□ -0.57
ITSN1-228ENST00000479424 NPHP1O15259 732 aa11.45□□□□□ -0.58
ITSN1-228ENST00000479424 NPR1P16066 1061 aa11.45□□□□□ -0.58
ITSN1-228ENST00000479424 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
ITSN1-228ENST00000479424 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
ITSN1-228ENST00000479424 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
ITSN1-228ENST00000479424 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
ITSN1-228ENST00000479424 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
ITSN1-228ENST00000479424 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
ITSN1-228ENST00000479424 SOGA3Q5TF21 947 aa11.44□□□□□ -0.58
ITSN1-228ENST00000479424 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
ITSN1-228ENST00000479424 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
ITSN1-228ENST00000479424 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
ITSN1-228ENST00000479424 ABCC12Q96J65 1359 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 COL4A5P29400 1685 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 PASKQ96RG2 1323 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 ZNF541Q9H0D2 1346 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 FKBP4Q02790 459 aaKnown RBP eCLIP11.43□□□□□ -0.58
ITSN1-228ENST00000479424 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
ITSN1-228ENST00000479424 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
ITSN1-228ENST00000479424 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
ITSN1-228ENST00000479424 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
ITSN1-228ENST00000479424 SLC51AQ86UW1 340 aa11.42□□□□□ -0.58
ITSN1-228ENST00000479424 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
ITSN1-228ENST00000479424 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
ITSN1-228ENST00000479424 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
ITSN1-228ENST00000479424 LAMB2P55268 1798 aa11.41□□□□□ -0.58
ITSN1-228ENST00000479424 FZD9O00144 591 aa11.41□□□□□ -0.58
ITSN1-228ENST00000479424 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
ITSN1-228ENST00000479424 TTLL7Q6ZT98 887 aa11.41□□□□□ -0.58
ITSN1-228ENST00000479424 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
ITSN1-228ENST00000479424 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
ITSN1-228ENST00000479424 TAF1P21675 1872 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 ERVV-1B6SEH8 477 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 LRP10Q7Z4F1 713 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 SYNE4Q8N205 404 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
ITSN1-228ENST00000479424 MKRN1Q9UHC7 482 aaKnown RBP11.4□□□□□ -0.58
ITSN1-228ENST00000479424 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
ITSN1-228ENST00000479424 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 ALDH1B1P30837 517 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
ITSN1-228ENST00000479424 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 TNS4Q8IZW8 715 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 TRPM7Q96QT4 1865 aa11.39□□□□□ -0.59
ITSN1-228ENST00000479424 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
ITSN1-228ENST00000479424 ZNF34Q8IZ26 560 aa11.38□□□□□ -0.59
ITSN1-228ENST00000479424 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
ITSN1-228ENST00000479424 PSMD1Q99460 953 aa11.38□□□□□ -0.59
ITSN1-228ENST00000479424 RRP7AQ9Y3A4 280 aaKnown RBP11.38□□□□□ -0.59
ITSN1-228ENST00000479424 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
ITSN1-228ENST00000479424 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms