RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 STK31Q9BXU1 1019 aa32.19■■■□□ 2.74
PERM1-203ENST00000479361 ERVV-1B6SEH8 477 aa32.18■■■□□ 2.74
PERM1-203ENST00000479361 VAMP4O75379 141 aa32.18■■■□□ 2.74
PERM1-203ENST00000479361 ZBED9Q6R2W3 1325 aa32.18■■■□□ 2.74
PERM1-203ENST00000479361 MAP3K15Q6ZN16 1313 aa32.18■■■□□ 2.74
PERM1-203ENST00000479361 TTLL7Q6ZT98 887 aa32.17■■■□□ 2.74
PERM1-203ENST00000479361 TRMT2AQ8IZ69 625 aaKnown RBP32.17■■■□□ 2.74
PERM1-203ENST00000479361 PARP3Q9Y6F1 533 aa32.17■■■□□ 2.74
PERM1-203ENST00000479361 COPS6Q7L5N1 327 aa32.16■■■□□ 2.74
PERM1-203ENST00000479361 XAGE3Q8WTP9 111 aa32.16■■■□□ 2.74
PERM1-203ENST00000479361 BCORQ6W2J9 1755 aa32.15■■■□□ 2.74
PERM1-203ENST00000479361 TM4SF1P30408 202 aa32.15■■■□□ 2.74
PERM1-203ENST00000479361 AIMP1Q12904 312 aaKnown RBP32.15■■■□□ 2.74
PERM1-203ENST00000479361 NFIXQ14938 502 aa32.14■■■□□ 2.74
PERM1-203ENST00000479361 ZBTB3Q9H5J0 574 aa32.13■■■□□ 2.73
PERM1-203ENST00000479361 TBC1D9BQ66K14 1250 aa32.12■■■□□ 2.73
PERM1-203ENST00000479361 BICDL1Q6ZP65 573 aa32.11■■■□□ 2.73
PERM1-203ENST00000479361 SETDB2Q96T68 719 aa32.11■■■□□ 2.73
PERM1-203ENST00000479361 POLRMTO00411 1230 aaKnown RBP32.1■■■□□ 2.73
PERM1-203ENST00000479361 DDR1Q08345 913 aa32.1■■■□□ 2.73
PERM1-203ENST00000479361 HLFQ16534 295 aa32.1■■■□□ 2.73
PERM1-203ENST00000479361 TCERG1O14776 1098 aaKnown RBP32.09■■■□□ 2.73
PERM1-203ENST00000479361 SLC4A2P04920 1241 aa32.09■■■□□ 2.73
PERM1-203ENST00000479361 CARMIL3Q8ND23 1372 aa32.08■■■□□ 2.73
PERM1-203ENST00000479361 GIGYF2Q6Y7W6 1299 aaKnown RBP32.08■■■□□ 2.73
PERM1-203ENST00000479361 ANKRD13DQ6ZTN6 518 aa32.08■■■□□ 2.73
PERM1-203ENST00000479361 ZNF428Q96B54 188 aa32.08■■■□□ 2.73
PERM1-203ENST00000479361 CT47B1P0C2W7 299 aaPredicted RBP32.07■■■□□ 2.72
PERM1-203ENST00000479361 PLBD2Q8NHP8 589 aa32.07■■■□□ 2.72
PERM1-203ENST00000479361 FHDC1Q9C0D6 1143 aaPredicted RBP32.07■■■□□ 2.72
PERM1-203ENST00000479361 PHAXQ9H814 394 aaKnown RBP32.07■■■□□ 2.72
PERM1-203ENST00000479361 NIP7Q9Y221 180 aaKnown RBP eCLIP32.07■■■□□ 2.72
PERM1-203ENST00000479361 DDX58O95786 925 aaKnown RBP32.06■■■□□ 2.72
PERM1-203ENST00000479361 KLHL34Q8N239 644 aa32.06■■■□□ 2.72
PERM1-203ENST00000479361 SERPINB2P05120 415 aa32.05■■■□□ 2.72
PERM1-203ENST00000479361 HSP90AB3PQ58FF7 597 aa32.05■■■□□ 2.72
PERM1-203ENST00000479361 CD2APQ9Y5K6 639 aa32.05■■■□□ 2.72
PERM1-203ENST00000479361 ATP10DQ9P241 1426 aa32.05■■■□□ 2.72
PERM1-203ENST00000479361 RIC3Q7Z5B4 369 aa32.02■■■□□ 2.72
PERM1-203ENST00000479361 NUP98P52948 1817 aa32.01■■■□□ 2.72
PERM1-203ENST00000479361 SYT17Q9BSW7 474 aa32.01■■■□□ 2.71
PERM1-203ENST00000479361 NPHP1O15259 732 aa32■■■□□ 2.71
PERM1-203ENST00000479361 CACNA1FO60840 1977 aa31.99■■■□□ 2.71
PERM1-203ENST00000479361 FLIIQ13045 1269 aa31.99■■■□□ 2.71
PERM1-203ENST00000479361 TCIRG1Q13488 830 aa31.99■■■□□ 2.71
PERM1-203ENST00000479361 NBPF5PQ86XG9 351 aaPredicted RBP31.99■■■□□ 2.71
PERM1-203ENST00000479361 ZNF34Q8IZ26 560 aa31.99■■■□□ 2.71
PERM1-203ENST00000479361 C10orf71Q711Q0 1435 aa31.99■■■□□ 2.71
PERM1-203ENST00000479361 GPTP24298 496 aa31.98■■■□□ 2.71
PERM1-203ENST00000479361 PARP10Q53GL7 1025 aa31.98■■■□□ 2.71
PERM1-203ENST00000479361 G2E3Q7L622 706 aa31.98■■■□□ 2.71
PERM1-203ENST00000479361 CNBD1Q8NA66 436 aa31.98■■■□□ 2.71
PERM1-203ENST00000479361 ALDH1L2Q3SY69 923 aa31.97■■■□□ 2.71
PERM1-203ENST00000479361 TPTE2Q6XPS3 522 aa31.97■■■□□ 2.71
PERM1-203ENST00000479361 NYXQ9GZU5 481 aa31.97■■■□□ 2.71
PERM1-203ENST00000479361 KSR2Q6VAB6 950 aa31.96■■■□□ 2.71
PERM1-203ENST00000479361 NRXN2Q9P2S2 1712 aa31.96■■■□□ 2.71
PERM1-203ENST00000479361 FKBP5Q13451 457 aaPredicted RBP31.95■■■□□ 2.71
PERM1-203ENST00000479361 AFDNP55196 1824 aaKnown RBP31.94■■■□□ 2.7
PERM1-203ENST00000479361 PI4KAP2A4QPH2 592 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 ST5P78524 1137 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 PRR5LQ6MZQ0 368 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 PPP1R42Q7Z4L9 355 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 PI4KAP1Q8N8J0 262 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 SSH1Q8WYL5 1049 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 UBN2Q6ZU65 1347 aa31.94■■■□□ 2.7
PERM1-203ENST00000479361 IBTKQ9P2D0 1353 aaPredicted RBP31.94■■■□□ 2.7
PERM1-203ENST00000479361 MAP3K2Q9Y2U5 619 aa31.93■■■□□ 2.7
PERM1-203ENST00000479361 ARFGEF2Q9Y6D5 1785 aa31.92■■■□□ 2.7
PERM1-203ENST00000479361 FAM177BA6PVY3 158 aa31.92■■■□□ 2.7
PERM1-203ENST00000479361 GTF2E1P29083 439 aaPredicted RBP31.92■■■□□ 2.7
PERM1-203ENST00000479361 TGFB2P61812 414 aa31.92■■■□□ 2.7
PERM1-203ENST00000479361 MRPL50Q8N5N7 158 aaKnown RBP31.91■■■□□ 2.7
PERM1-203ENST00000479361 NLGN2Q8NFZ4 835 aa31.91■■■□□ 2.7
PERM1-203ENST00000479361 METTL22Q9BUU2 404 aaPredicted RBP31.91■■■□□ 2.7
PERM1-203ENST00000479361 SMC4Q9NTJ3 1288 aa31.91■■■□□ 2.7
PERM1-203ENST00000479361 ADCY9O60503 1353 aa31.91■■■□□ 2.7
PERM1-203ENST00000479361 ANKRD36CQ5JPF3 1778 aa31.91■■■□□ 2.7
PERM1-203ENST00000479361 KIF13BQ9NQT8 1826 aa31.91■■■□□ 2.7
PERM1-203ENST00000479361 SUSD4Q5VX71 490 aa31.9■■■□□ 2.7
PERM1-203ENST00000479361 NLRP10Q86W26 655 aa31.9■■■□□ 2.7
PERM1-203ENST00000479361 ISCA1Q9BUE6 129 aa31.9■■■□□ 2.7
PERM1-203ENST00000479361 NEXNQ0ZGT2 675 aa31.89■■■□□ 2.7
PERM1-203ENST00000479361 TRIM28Q13263 835 aaKnown RBP31.89■■■□□ 2.7
PERM1-203ENST00000479361 MYD88Q99836 296 aa31.89■■■□□ 2.7
PERM1-203ENST00000479361 UTP14AQ9BVJ6 771 aaKnown RBP31.89■■■□□ 2.7
PERM1-203ENST00000479361 BRIP1Q9BX63 1249 aa31.89■■■□□ 2.7
PERM1-203ENST00000479361 ATP5J2-PTCD1G3V325 749 aa31.88■■■□□ 2.69
PERM1-203ENST00000479361 BCL2L13Q9BXK5 485 aa31.88■■■□□ 2.69
PERM1-203ENST00000479361 RNF123Q5XPI4 1314 aa31.88■■■□□ 2.69
PERM1-203ENST00000479361 PDE6BP35913 854 aa31.87■■■□□ 2.69
PERM1-203ENST00000479361 YTHDC1Q96MU7 727 aaKnown RBP31.87■■■□□ 2.69
PERM1-203ENST00000479361 PTPRCP08575 1304 aa31.86■■■□□ 2.69
PERM1-203ENST00000479361 NTSR2O95665 410 aa31.86■■■□□ 2.69
PERM1-203ENST00000479361 RARSP54136 660 aaKnown RBP31.86■■■□□ 2.69
PERM1-203ENST00000479361 DNAAF4Q8WXU2 420 aa31.86■■■□□ 2.69
PERM1-203ENST00000479361 PDZRN3Q9UPQ7 1066 aa31.86■■■□□ 2.69
PERM1-203ENST00000479361 CCDC24Q8N4L8 307 aa31.85■■■□□ 2.69
PERM1-203ENST00000479361 CCDC191Q8NCU4 936 aa31.85■■■□□ 2.69
PERM1-203ENST00000479361 PXDNLA1KZ92 1463 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms