RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 PHF20L1A8MW92 1017 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 SHISA8B8ZZ34 492 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 IRS1P35568 1242 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 CRTC2Q53ET0 693 aaPredicted RBP7.24□□□□□ -1.25
SPC25-204ENST00000479309 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
SPC25-204ENST00000479309 NEDD1Q8NHV4 660 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 VRTNQ9H8Y1 702 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 ZNF232Q9UNY5 417 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
SPC25-204ENST00000479309 EPXP11678 715 aa7.23□□□□□ -1.25
SPC25-204ENST00000479309 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
SPC25-204ENST00000479309 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
SPC25-204ENST00000479309 C2orf49Q9BVC5 232 aaPredicted RBP7.23□□□□□ -1.25
SPC25-204ENST00000479309 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
SPC25-204ENST00000479309 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
SPC25-204ENST00000479309 DNMT3AQ9Y6K1 912 aaPredicted RBP7.23□□□□□ -1.25
SPC25-204ENST00000479309 CNTNAP5Q8WYK1 1306 aa7.23□□□□□ -1.25
SPC25-204ENST00000479309 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L15C9J2P7 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L10C9JJH3 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L13C9JLJ4 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L11C9JVI0 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L21D6R901 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L18D6R9N7 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L22D6RA61 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L17D6RBQ6 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L19D6RCP7 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L20D6RJB6 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 KHNYNO15037 678 aaKnown RBP7.22□□□□□ -1.25
SPC25-204ENST00000479309 HOXB4P17483 251 aaPredicted RBP7.22□□□□□ -1.25
SPC25-204ENST00000479309 USP17L24Q0WX57 530 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 ARXQ96QS3 562 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 ANKIB1Q9P2G1 1089 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 KLF15Q9UIH9 416 aa7.22□□□□□ -1.25
SPC25-204ENST00000479309 ZNF777Q9ULD5 760 aaPredicted RBP7.22□□□□□ -1.25
SPC25-204ENST00000479309 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
SPC25-204ENST00000479309 CD33P20138 364 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 IGFBP4P22692 258 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 ADH6P28332 368 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 DPYDQ12882 1025 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 ZNF468Q5VIY5 522 aaPredicted RBP7.21□□□□□ -1.26
SPC25-204ENST00000479309 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 PHACTR1Q9C0D0 580 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 STRN4Q9NRL3 753 aa7.21□□□□□ -1.26
SPC25-204ENST00000479309 KCNQ4P56696 695 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 GPAT2Q6NUI2 795 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 BTBD6Q96KE9 485 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 MDFIQ99750 246 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 NEUROD4Q9HD90 331 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 HCN4Q9Y3Q4 1203 aa7.2□□□□□ -1.26
SPC25-204ENST00000479309 NEURL1BA8MQ27 555 aa7.19□□□□□ -1.26
SPC25-204ENST00000479309 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
SPC25-204ENST00000479309 HIF1AQ16665 826 aa7.19□□□□□ -1.26
SPC25-204ENST00000479309 ALYREFQ86V81 257 aaKnown RBP7.19□□□□□ -1.26
SPC25-204ENST00000479309 ALDH16A1Q8IZ83 802 aa7.19□□□□□ -1.26
SPC25-204ENST00000479309 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
SPC25-204ENST00000479309 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
SPC25-204ENST00000479309 IGHA1P01876 353 aa7.18□□□□□ -1.26
SPC25-204ENST00000479309 LINC00114Q6XXX2 140 aa7.18□□□□□ -1.26
SPC25-204ENST00000479309 FCHSD1Q86WN1 690 aa7.18□□□□□ -1.26
SPC25-204ENST00000479309 SUSD3Q96L08 255 aa7.18□□□□□ -1.26
SPC25-204ENST00000479309 WEE1P30291 646 aa7.17□□□□□ -1.26
SPC25-204ENST00000479309 SRPK2P78362 688 aaKnown RBP7.17□□□□□ -1.26
SPC25-204ENST00000479309 ELOAQ14241 798 aaKnown RBP7.17□□□□□ -1.26
SPC25-204ENST00000479309 IER5Q5VY09 327 aa7.17□□□□□ -1.26
SPC25-204ENST00000479309 DCAF5Q96JK2 942 aa7.17□□□□□ -1.26
SPC25-204ENST00000479309 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
SPC25-204ENST00000479309 ZMYND15Q9H091 742 aa7.17□□□□□ -1.26
SPC25-204ENST00000479309 PIK3R2O00459 728 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 SIN3BO75182 1162 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 DGKGP49619 791 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 TYRO3Q06418 890 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
SPC25-204ENST00000479309 RTN1Q16799 776 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 ZNF280CQ8ND82 737 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 PRR12Q9ULL5 1215 aa7.16□□□□□ -1.26
SPC25-204ENST00000479309 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 FOXO3O43524 673 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 FAM200AQ8TCP9 573 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 TNFRSF25Q93038 417 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 EFCC1Q9HA90 598 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
SPC25-204ENST00000479309 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
SPC25-204ENST00000479309 ELOA3DA6NLF2 546 aaPredicted RBP7.14□□□□□ -1.27
SPC25-204ENST00000479309 PCBP4P57723 403 aaKnown RBP7.14□□□□□ -1.27
SPC25-204ENST00000479309 ELOA3BQ3SY89 546 aa7.14□□□□□ -1.27
SPC25-204ENST00000479309 CHSY3Q70JA7 882 aa7.14□□□□□ -1.27
SPC25-204ENST00000479309 SYT9Q86SS6 491 aa7.14□□□□□ -1.27
SPC25-204ENST00000479309 ELOA3Q8NG57 546 aa7.14□□□□□ -1.27
SPC25-204ENST00000479309 CEP63Q96MT8 703 aa7.14□□□□□ -1.27
SPC25-204ENST00000479309 DMGDHQ9UI17 866 aaKnown RBP7.14□□□□□ -1.27
SPC25-204ENST00000479309 GNB5O14775 395 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 ADAM23O75077 832 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms