RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
HDAC8-217ENST00000478743 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
HDAC8-217ENST00000478743 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
HDAC8-217ENST00000478743 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
HDAC8-217ENST00000478743 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
HDAC8-217ENST00000478743 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
HDAC8-217ENST00000478743 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
HDAC8-217ENST00000478743 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
HDAC8-217ENST00000478743 PDE6BP35913 854 aa17.14■□□□□ 0.33
HDAC8-217ENST00000478743 PNMA8AQ86V59 439 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-217ENST00000478743 MAP2K2P36507 400 aa17.13■□□□□ 0.33
HDAC8-217ENST00000478743 MTHFSP49914 203 aa17.13■□□□□ 0.33
HDAC8-217ENST00000478743 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
HDAC8-217ENST00000478743 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
HDAC8-217ENST00000478743 MRC1P22897 1456 aa17.12■□□□□ 0.33
HDAC8-217ENST00000478743 SRGNP10124 158 aa17.12■□□□□ 0.33
HDAC8-217ENST00000478743 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
HDAC8-217ENST00000478743 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-217ENST00000478743 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-217ENST00000478743 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
HDAC8-217ENST00000478743 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
HDAC8-217ENST00000478743 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
HDAC8-217ENST00000478743 FZD9O00144 591 aa17.1■□□□□ 0.33
HDAC8-217ENST00000478743 CA12O43570 354 aa17.1■□□□□ 0.33
HDAC8-217ENST00000478743 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
HDAC8-217ENST00000478743 EPS15P42566 896 aa17.1■□□□□ 0.33
HDAC8-217ENST00000478743 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-217ENST00000478743 CCDC93Q567U6 631 aa17.1■□□□□ 0.33
HDAC8-217ENST00000478743 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
HDAC8-217ENST00000478743 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
HDAC8-217ENST00000478743 SCNN1DP51172 638 aa17.08■□□□□ 0.32
HDAC8-217ENST00000478743 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
HDAC8-217ENST00000478743 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
HDAC8-217ENST00000478743 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
HDAC8-217ENST00000478743 GPC2Q8N158 579 aa17.07■□□□□ 0.32
HDAC8-217ENST00000478743 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
HDAC8-217ENST00000478743 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
HDAC8-217ENST00000478743 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
HDAC8-217ENST00000478743 HABP4Q5JVS0 413 aaKnown RBP17.06■□□□□ 0.32
HDAC8-217ENST00000478743 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
HDAC8-217ENST00000478743 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
HDAC8-217ENST00000478743 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
HDAC8-217ENST00000478743 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
HDAC8-217ENST00000478743 TBC1D2BQ9UPU7 963 aa17.05■□□□□ 0.32
HDAC8-217ENST00000478743 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
HDAC8-217ENST00000478743 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
HDAC8-217ENST00000478743 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
HDAC8-217ENST00000478743 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
HDAC8-217ENST00000478743 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
HDAC8-217ENST00000478743 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
HDAC8-217ENST00000478743 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
HDAC8-217ENST00000478743 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
HDAC8-217ENST00000478743 MKI67P46013 3256 aaKnown RBP17■□□□□ 0.31
HDAC8-217ENST00000478743 CAMTA2O94983 1202 aa17■□□□□ 0.31
HDAC8-217ENST00000478743 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
HDAC8-217ENST00000478743 ST5P78524 1137 aa17■□□□□ 0.31
HDAC8-217ENST00000478743 DLK2Q6UY11 383 aa17■□□□□ 0.31
HDAC8-217ENST00000478743 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
HDAC8-217ENST00000478743 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
HDAC8-217ENST00000478743 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
HDAC8-217ENST00000478743 NPHP1O15259 732 aa16.98■□□□□ 0.31
HDAC8-217ENST00000478743 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC8-217ENST00000478743 USP50Q70EL3 339 aaPredicted RBP16.98■□□□□ 0.31
HDAC8-217ENST00000478743 NPR1P16066 1061 aa16.97■□□□□ 0.31
HDAC8-217ENST00000478743 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
HDAC8-217ENST00000478743 A0A087WZG4 1122 aa16.96■□□□□ 0.31
HDAC8-217ENST00000478743 FAM155AB1AL88 458 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-217ENST00000478743 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
HDAC8-217ENST00000478743 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
HDAC8-217ENST00000478743 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
HDAC8-217ENST00000478743 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
HDAC8-217ENST00000478743 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
HDAC8-217ENST00000478743 NOGQ13253 232 aa16.95■□□□□ 0.3
HDAC8-217ENST00000478743 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
HDAC8-217ENST00000478743 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
HDAC8-217ENST00000478743 TRPA1O75762 1119 aa16.94■□□□□ 0.3
HDAC8-217ENST00000478743 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
HDAC8-217ENST00000478743 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
HDAC8-217ENST00000478743 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
HDAC8-217ENST00000478743 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
HDAC8-217ENST00000478743 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
HDAC8-217ENST00000478743 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
HDAC8-217ENST00000478743 PSMD1Q99460 953 aa16.93■□□□□ 0.3
HDAC8-217ENST00000478743 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
HDAC8-217ENST00000478743 A1BGP04217 495 aa16.92■□□□□ 0.3
HDAC8-217ENST00000478743 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
HDAC8-217ENST00000478743 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
HDAC8-217ENST00000478743 HUNKP57058 714 aa16.92■□□□□ 0.3
HDAC8-217ENST00000478743 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
HDAC8-217ENST00000478743 GPRC5DQ9NZD1 345 aa16.92■□□□□ 0.3
HDAC8-217ENST00000478743 SZT2Q5T011 3432 aa16.92■□□□□ 0.3
HDAC8-217ENST00000478743 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
HDAC8-217ENST00000478743 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-217ENST00000478743 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-217ENST00000478743 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
HDAC8-217ENST00000478743 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-217ENST00000478743 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
HDAC8-217ENST00000478743 STARD3NLO95772 234 aa16.9■□□□□ 0.3
HDAC8-217ENST00000478743 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.3
HDAC8-217ENST00000478743 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms