RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PDE6BP35913 854 aa20.93■□□□□ 0.94
GARNL3-215ENST00000478702 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
GARNL3-215ENST00000478702 PDZRN3Q9UPQ7 1066 aa20.93■□□□□ 0.94
GARNL3-215ENST00000478702 LAMB4A4D0S4 1761 aa20.92■□□□□ 0.94
GARNL3-215ENST00000478702 FMNL2Q96PY5 1086 aa20.92■□□□□ 0.94
GARNL3-215ENST00000478702 PLEKHF1Q96S99 279 aa20.92■□□□□ 0.94
GARNL3-215ENST00000478702 SCN4AP35499 1836 aa20.92■□□□□ 0.94
GARNL3-215ENST00000478702 LTBP3Q9NS15 1303 aa20.9■□□□□ 0.94
GARNL3-215ENST00000478702 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
GARNL3-215ENST00000478702 DPY19L2Q6NUT2 758 aa20.9■□□□□ 0.94
GARNL3-215ENST00000478702 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
GARNL3-215ENST00000478702 NEFMP07197 916 aa20.89■□□□□ 0.93
GARNL3-215ENST00000478702 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
GARNL3-215ENST00000478702 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
GARNL3-215ENST00000478702 HTATSF1O43719 755 aaKnown RBP20.88■□□□□ 0.93
GARNL3-215ENST00000478702 HSPA1AP0DMV8 641 aaKnown RBP20.88■□□□□ 0.93
GARNL3-215ENST00000478702 HSPA1BP0DMV9 641 aaKnown RBP20.88■□□□□ 0.93
GARNL3-215ENST00000478702 SRGNP10124 158 aa20.88■□□□□ 0.93
GARNL3-215ENST00000478702 PIP4K2AP48426 406 aaPredicted RBP20.88■□□□□ 0.93
GARNL3-215ENST00000478702 CNBD1Q8NA66 436 aa20.88■□□□□ 0.93
GARNL3-215ENST00000478702 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
GARNL3-215ENST00000478702 SETDB2Q96T68 719 aa20.88■□□□□ 0.93
GARNL3-215ENST00000478702 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
GARNL3-215ENST00000478702 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
GARNL3-215ENST00000478702 STYK1Q6J9G0 422 aa20.87■□□□□ 0.93
GARNL3-215ENST00000478702 MCM10Q7L590 875 aa20.87■□□□□ 0.93
GARNL3-215ENST00000478702 DZIP3Q86Y13 1208 aaKnown RBP20.87■□□□□ 0.93
GARNL3-215ENST00000478702 TAOK3Q9H2K8 898 aa20.87■□□□□ 0.93
GARNL3-215ENST00000478702 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
GARNL3-215ENST00000478702 NUP98P52948 1817 aa20.86■□□□□ 0.93
GARNL3-215ENST00000478702 DDNO94850 711 aaPredicted RBP20.86■□□□□ 0.93
GARNL3-215ENST00000478702 POTEIP0CG38 1075 aa20.86■□□□□ 0.93
GARNL3-215ENST00000478702 POTEJP0CG39 1038 aa20.86■□□□□ 0.93
GARNL3-215ENST00000478702 NFE2L2Q16236 605 aa20.86■□□□□ 0.93
GARNL3-215ENST00000478702 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
GARNL3-215ENST00000478702 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
GARNL3-215ENST00000478702 TNS4Q8IZW8 715 aa20.85■□□□□ 0.93
GARNL3-215ENST00000478702 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
GARNL3-215ENST00000478702 CAPN15O75808 1086 aa20.84■□□□□ 0.93
GARNL3-215ENST00000478702 ST5P78524 1137 aa20.84■□□□□ 0.93
GARNL3-215ENST00000478702 DCTN1Q14203 1278 aa20.84■□□□□ 0.93
GARNL3-215ENST00000478702 ADAMTSL1Q8N6G6 1762 aa20.84■□□□□ 0.93
GARNL3-215ENST00000478702 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
GARNL3-215ENST00000478702 C7orf43Q8WVR3 580 aa20.83■□□□□ 0.93
GARNL3-215ENST00000478702 NPHP1O15259 732 aa20.82■□□□□ 0.92
GARNL3-215ENST00000478702 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
GARNL3-215ENST00000478702 CLEC4GQ6UXB4 293 aa20.81■□□□□ 0.92
GARNL3-215ENST00000478702 NBPF26B4DH59 902 aa20.8■□□□□ 0.92
GARNL3-215ENST00000478702 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
GARNL3-215ENST00000478702 SOGA3Q5TF21 947 aa20.8■□□□□ 0.92
GARNL3-215ENST00000478702 NBPF10Q6P3W6 841 aaKnown RBP20.8■□□□□ 0.92
GARNL3-215ENST00000478702 NBPF15Q8N660 670 aa20.8■□□□□ 0.92
GARNL3-215ENST00000478702 CREBZFQ9NS37 354 aa20.8■□□□□ 0.92
GARNL3-215ENST00000478702 KLRG2A4D1S0 409 aaPredicted RBP20.79■□□□□ 0.92
GARNL3-215ENST00000478702 SNRPA1P09661 255 aaKnown RBP20.79■□□□□ 0.92
GARNL3-215ENST00000478702 NBPF5PQ86XG9 351 aaPredicted RBP20.79■□□□□ 0.92
GARNL3-215ENST00000478702 MKRN1Q9UHC7 482 aaKnown RBP20.78■□□□□ 0.92
GARNL3-215ENST00000478702 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
GARNL3-215ENST00000478702 NPR1P16066 1061 aa20.77■□□□□ 0.92
GARNL3-215ENST00000478702 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
GARNL3-215ENST00000478702 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
GARNL3-215ENST00000478702 L3MBTL3Q96JM7 780 aaPredicted RBP20.77■□□□□ 0.92
GARNL3-215ENST00000478702 TAF7Q15545 349 aaPredicted RBP20.76■□□□□ 0.91
GARNL3-215ENST00000478702 THUMPD2Q9BTF0 503 aaKnown RBP20.76■□□□□ 0.91
GARNL3-215ENST00000478702 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
GARNL3-215ENST00000478702 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
GARNL3-215ENST00000478702 ZNF652Q9Y2D9 606 aa20.76■□□□□ 0.91
GARNL3-215ENST00000478702 SNED1Q8TER0 1413 aa20.76■□□□□ 0.91
GARNL3-215ENST00000478702 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
GARNL3-215ENST00000478702 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
GARNL3-215ENST00000478702 FKBP4Q02790 459 aaKnown RBP eCLIP20.75■□□□□ 0.91
GARNL3-215ENST00000478702 HLFQ16534 295 aa20.75■□□□□ 0.91
GARNL3-215ENST00000478702 CCDC146Q8IYE0 955 aa20.75■□□□□ 0.91
GARNL3-215ENST00000478702 RUNDC1Q96C34 613 aa20.75■□□□□ 0.91
GARNL3-215ENST00000478702 CNTNAP1P78357 1384 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 IQCA1LA6NCM1 817 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 RGL2O15211 777 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 TPTE2Q6XPS3 522 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 LDHDQ86WU2 507 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
GARNL3-215ENST00000478702 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
GARNL3-215ENST00000478702 ADAMTS8Q9UP79 889 aa20.74■□□□□ 0.91
GARNL3-215ENST00000478702 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
GARNL3-215ENST00000478702 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
GARNL3-215ENST00000478702 RIPK4P57078 832 aa20.73■□□□□ 0.91
GARNL3-215ENST00000478702 LMOD3Q0VAK6 560 aa20.73■□□□□ 0.91
GARNL3-215ENST00000478702 COL4A5P29400 1685 aa20.73■□□□□ 0.91
GARNL3-215ENST00000478702 ITGBL1O95965 494 aaPredicted RBP20.72■□□□□ 0.91
GARNL3-215ENST00000478702 MIS18AQ9NYP9 233 aa20.71■□□□□ 0.91
GARNL3-215ENST00000478702 ABCC12Q96J65 1359 aa20.71■□□□□ 0.91
GARNL3-215ENST00000478702 RRP7AQ9Y3A4 280 aaKnown RBP20.7■□□□□ 0.9
GARNL3-215ENST00000478702 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
GARNL3-215ENST00000478702 FZD9O00144 591 aa20.69■□□□□ 0.9
GARNL3-215ENST00000478702 FOXN1O15353 648 aa20.69■□□□□ 0.9
GARNL3-215ENST00000478702 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
GARNL3-215ENST00000478702 RTKN2Q8IZC4 609 aa20.69■□□□□ 0.9
GARNL3-215ENST00000478702 ANP32CO43423 234 aa20.68■□□□□ 0.9
GARNL3-215ENST00000478702 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
GARNL3-215ENST00000478702 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
GARNL3-215ENST00000478702 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms