RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NFKBIAP25963 317 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 PLCB4Q15147 1175 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 MSL1Q68DK7 614 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 TEKT2Q9UIF3 430 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 SNTNA6NMZ2 147 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 CCDC178Q5BJE1 867 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 PALM2Q8IXS6 379 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 STAC3Q96MF2 364 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 CTNNA3Q9UI47 895 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 GRIN1Q05586 938 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 KIF2CQ99661 725 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 ANKFY1Q9P2R3 1169 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 AKAP2Q9Y2D5 859 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 LRRFIP2Q9Y608 721 aaKnown RBP6.2□□□□□ -1.42
USF3-202ENST00000478658 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 TUBBP07437 444 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 CCDC192P0DO97 292 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 ARL1P40616 181 aaPredicted RBP6.2□□□□□ -1.42
USF3-202ENST00000478658 FLOT2Q14254 428 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 GBP5Q96PP8 586 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 A0A1W2PRG0 241 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 EVCP57679 992 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 TMCO5AQ8N6Q1 288 aa6.2□□□□□ -1.42
USF3-202ENST00000478658 API5Q9BZZ5 524 aaKnown RBP6.2□□□□□ -1.42
USF3-202ENST00000478658 ZFYVE1Q9HBF4 777 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 SPECC1L-ADORA2AF8WAN1 911 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 KRT3P12035 628 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 RILPL1Q5EBL4 403 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 JAKMIP1Q96N16 626 aaKnown RBP6.19□□□□□ -1.42
USF3-202ENST00000478658 SELENOOQ9BVL4 669 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 TRIM7Q9C029 511 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 ZBED9Q6R2W3 1325 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 A0A087WZG4 1122 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 SYF2O95926 243 aaKnown RBP6.19□□□□□ -1.42
USF3-202ENST00000478658 GNAI3P08754 354 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 PDE6AP16499 860 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 KIF5BP33176 963 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 ANGPT1Q15389 498 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 CCDC129Q6ZRS4 1044 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 PPFIA1Q13136 1202 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 RAB3GAP1Q15042 981 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 WASHC4Q2M389 1173 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 TSPYL2Q9H2G4 693 aaPredicted RBP6.19□□□□□ -1.42
USF3-202ENST00000478658 CCDC144AA2RUR9 1427 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 SERPINC1P01008 464 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 TUBB4AP04350 444 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 POTEDQ86YR6 584 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 DRC3Q9H069 523 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 DDX19BQ9UMR2 479 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 UBE4AQ14139 1066 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 VPS52Q8N1B4 723 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 NECAB1Q8N987 351 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 L3MBTL3Q96JM7 780 aaPredicted RBP6.19□□□□□ -1.42
USF3-202ENST00000478658 STK24Q9Y6E0 443 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 RAB3GAP2Q9H2M9 1393 aa6.19□□□□□ -1.42
USF3-202ENST00000478658 GOLGA3Q08378 1498 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 NEMFO60524 1076 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 KRT10P13645 584 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 ZNF165P49910 485 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CC2D1BQ5T0F9 858 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 IQCA1Q86XH1 822 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 EXOC4Q96A65 974 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 IMPG2Q9BZV3 1241 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 GOLGA8RI6L899 631 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CAVIN2O95810 425 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 SKILP12757 684 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 RRP1P56182 461 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 KRT32Q14532 448 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 ARHGEF6Q15052 776 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 LGSNQ5TDP6 509 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 THOC7Q6I9Y2 204 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 ERMNQ8TAM6 284 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 MXRA7P84157 204 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 RUFY4Q6ZNE9 571 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CCDC170Q8IYT3 715 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 RILPL2Q969X0 211 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 TRIM55Q9BYV6 548 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CTAGE8P0CG41 777 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 PSME1Q06323 249 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 BRDTQ58F21 947 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 MCM10Q7L590 875 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CTAGE4Q8IX94 777 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 LMBR1Q8WVP7 490 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 Q9H521 79 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 LUC7L3O95232 432 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 KRT8P05787 483 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.42
USF3-202ENST00000478658 PPP2R5AQ15172 486 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 PAXIP1Q6ZW49 1069 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 NSMCE1Q8WV22 266 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 ZFP91Q96JP5 570 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 SYCE3A1L190 88 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms