RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 TNS4Q8IZW8 715 aa8□□□□□ -1.13
HPS3-205ENST00000478525 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
HPS3-205ENST00000478525 SPATA31C1P0DKV0 1188 aa7.99□□□□□ -1.13
HPS3-205ENST00000478525 C7orf43Q8WVR3 580 aa7.99□□□□□ -1.13
HPS3-205ENST00000478525 POM121Q96HA1 1249 aa7.99□□□□□ -1.13
HPS3-205ENST00000478525 ZNF232Q9UNY5 417 aa7.99□□□□□ -1.13
HPS3-205ENST00000478525 SLC30A3Q99726 388 aa7.98□□□□□ -1.13
HPS3-205ENST00000478525 KIAA1024Q9UPX6 916 aa7.98□□□□□ -1.13
HPS3-205ENST00000478525 SIN3BO75182 1162 aa7.97□□□□□ -1.13
HPS3-205ENST00000478525 SFSWAPQ12872 951 aaKnown RBP7.97□□□□□ -1.13
HPS3-205ENST00000478525 TPCN2Q8NHX9 752 aa7.97□□□□□ -1.13
HPS3-205ENST00000478525 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
HPS3-205ENST00000478525 SERTM1A2A2V5 107 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 ADARB2-AS1A8MUL3 147 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 ALAS2P22557 587 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 GATA4P43694 442 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 RHPN1Q8TCX5 695 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 ADAMTS19Q8TE59 1207 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 SEMA6BQ9H3T3 888 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 STARD13Q9Y3M8 1113 aa7.96□□□□□ -1.14
HPS3-205ENST00000478525 M0R082 166 aa7.95□□□□□ -1.14
HPS3-205ENST00000478525 COL9A3Q14050 684 aaPredicted RBP7.95□□□□□ -1.14
HPS3-205ENST00000478525 RAB44Q7Z6P3 723 aaPredicted RBP7.95□□□□□ -1.14
HPS3-205ENST00000478525 ZNF417Q8TAU3 575 aa7.95□□□□□ -1.14
HPS3-205ENST00000478525 TNFRSF25Q93038 417 aa7.95□□□□□ -1.14
HPS3-205ENST00000478525 HSH2DQ96JZ2 352 aa7.95□□□□□ -1.14
HPS3-205ENST00000478525 ZNF587Q96SQ5 575 aaPredicted RBP7.95□□□□□ -1.14
HPS3-205ENST00000478525 TSPAN10Q9H1Z9 355 aaPredicted RBP7.95□□□□□ -1.14
HPS3-205ENST00000478525 NEUROD4Q9HD90 331 aa7.95□□□□□ -1.14
HPS3-205ENST00000478525 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 ZBTB7BO15156 539 aaPredicted RBP7.94□□□□□ -1.14
HPS3-205ENST00000478525 ALBP02768 609 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 CLDN10P78369 228 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
HPS3-205ENST00000478525 SPDYE3A6NKU9 549 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 PSMA6P60900 246 aaKnown RBP7.93□□□□□ -1.14
HPS3-205ENST00000478525 PRRT3Q5FWE3 981 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 CCDC102BQ68D86 513 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 C8orf86Q6ZUL3 223 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 BRD7Q9NPI1 651 aa7.93□□□□□ -1.14
HPS3-205ENST00000478525 ADH7P40394 386 aa7.92□□□□□ -1.14
HPS3-205ENST00000478525 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
HPS3-205ENST00000478525 RSPO4Q2I0M5 234 aaPredicted RBP7.92□□□□□ -1.14
HPS3-205ENST00000478525 POTEAQ6S8J7 498 aa7.92□□□□□ -1.14
HPS3-205ENST00000478525 PHACTR1Q9C0D0 580 aa7.92□□□□□ -1.14
HPS3-205ENST00000478525 PRDM6Q9NQX0 595 aa7.92□□□□□ -1.14
HPS3-205ENST00000478525 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.91□□□□□ -1.14
HPS3-205ENST00000478525 ATP1A2P50993 1020 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 TYRO3Q06418 890 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 C1orf53Q5VUE5 145 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 MICALL1Q8N3F8 863 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 TPSG1Q9NRR2 321 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 HCN4Q9Y3Q4 1203 aa7.91□□□□□ -1.14
HPS3-205ENST00000478525 APBA3O96018 575 aa7.9□□□□□ -1.14
HPS3-205ENST00000478525 NID1P14543 1247 aa7.9□□□□□ -1.14
HPS3-205ENST00000478525 ZMYM1Q5SVZ6 1142 aa7.9□□□□□ -1.14
HPS3-205ENST00000478525 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.14
HPS3-205ENST00000478525 KCNQ4P56696 695 aa7.89□□□□□ -1.15
HPS3-205ENST00000478525 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
HPS3-205ENST00000478525 OGFOD1Q8N543 542 aa7.89□□□□□ -1.15
HPS3-205ENST00000478525 TSEN2Q8NCE0 465 aaKnown RBP7.89□□□□□ -1.15
HPS3-205ENST00000478525 SUSD3Q96L08 255 aa7.89□□□□□ -1.15
HPS3-205ENST00000478525 CHMP3Q9Y3E7 222 aa7.89□□□□□ -1.15
HPS3-205ENST00000478525 SFI1A8K8P3 1242 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 M0R2N6 131 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 ATP9BO43861 1147 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 RAD21O60216 631 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 C20orf204Q6ZNR8 217 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
HPS3-205ENST00000478525 KCNH4Q9UQ05 1017 aa7.88□□□□□ -1.15
HPS3-205ENST00000478525 C21orf2O43822 256 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 GRIK4Q16099 956 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 FOXD4L6Q3SYB3 417 aaPredicted RBP7.87□□□□□ -1.15
HPS3-205ENST00000478525 FOXD4L3Q6VB84 417 aaPredicted RBP7.87□□□□□ -1.15
HPS3-205ENST00000478525 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 SIX5Q8N196 739 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 LARGE2Q8N3Y3 721 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 ANKIB1Q9P2G1 1089 aa7.87□□□□□ -1.15
HPS3-205ENST00000478525 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
HPS3-205ENST00000478525 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
HPS3-205ENST00000478525 PALM3A6NDB9 673 aaPredicted RBP7.86□□□□□ -1.15
HPS3-205ENST00000478525 DYRK3O43781 588 aa7.86□□□□□ -1.15
HPS3-205ENST00000478525 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
HPS3-205ENST00000478525 DKK1O94907 266 aa7.86□□□□□ -1.15
HPS3-205ENST00000478525 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
HPS3-205ENST00000478525 TRIM28Q13263 835 aaKnown RBP7.86□□□□□ -1.15
HPS3-205ENST00000478525 HDGFL1Q5TGJ6 251 aa7.86□□□□□ -1.15
HPS3-205ENST00000478525 BHMTQ93088 406 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms