RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
TDP2-204ENST00000478507 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
TDP2-204ENST00000478507 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
TDP2-204ENST00000478507 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
TDP2-204ENST00000478507 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
TDP2-204ENST00000478507 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
TDP2-204ENST00000478507 KLRG2A4D1S0 409 aaPredicted RBP17.15■□□□□ 0.34
TDP2-204ENST00000478507 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
TDP2-204ENST00000478507 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
TDP2-204ENST00000478507 CLEC4GQ6UXB4 293 aa17.15■□□□□ 0.34
TDP2-204ENST00000478507 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
TDP2-204ENST00000478507 RGL2O15211 777 aa17.14■□□□□ 0.33
TDP2-204ENST00000478507 ST5P78524 1137 aa17.14■□□□□ 0.33
TDP2-204ENST00000478507 SCN4AP35499 1836 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
TDP2-204ENST00000478507 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
TDP2-204ENST00000478507 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
TDP2-204ENST00000478507 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
TDP2-204ENST00000478507 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
TDP2-204ENST00000478507 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
TDP2-204ENST00000478507 MCM10Q7L590 875 aa17.12■□□□□ 0.33
TDP2-204ENST00000478507 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
TDP2-204ENST00000478507 L3MBTL3Q96JM7 780 aaPredicted RBP17.12■□□□□ 0.33
TDP2-204ENST00000478507 CFAP53Q96M91 514 aa17.12■□□□□ 0.33
TDP2-204ENST00000478507 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
TDP2-204ENST00000478507 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
TDP2-204ENST00000478507 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
TDP2-204ENST00000478507 NPHP1O15259 732 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 NPR1P16066 1061 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 CREBZFQ9NS37 354 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 ZNF652Q9Y2D9 606 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 ADAMTSL1Q8N6G6 1762 aa17.1■□□□□ 0.33
TDP2-204ENST00000478507 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
TDP2-204ENST00000478507 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
TDP2-204ENST00000478507 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
TDP2-204ENST00000478507 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
TDP2-204ENST00000478507 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
TDP2-204ENST00000478507 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
TDP2-204ENST00000478507 KDM3BQ7LBC6 1761 aa17.08■□□□□ 0.33
TDP2-204ENST00000478507 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
TDP2-204ENST00000478507 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
TDP2-204ENST00000478507 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
TDP2-204ENST00000478507 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
TDP2-204ENST00000478507 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
TDP2-204ENST00000478507 HLFQ16534 295 aa17.07■□□□□ 0.32
TDP2-204ENST00000478507 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
TDP2-204ENST00000478507 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
TDP2-204ENST00000478507 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
TDP2-204ENST00000478507 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
TDP2-204ENST00000478507 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
TDP2-204ENST00000478507 IQCA1LA6NCM1 817 aa17.06■□□□□ 0.32
TDP2-204ENST00000478507 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
TDP2-204ENST00000478507 NUP98P52948 1817 aa17.05■□□□□ 0.32
TDP2-204ENST00000478507 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
TDP2-204ENST00000478507 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
TDP2-204ENST00000478507 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
TDP2-204ENST00000478507 CNTNAP1P78357 1384 aa17.04■□□□□ 0.32
TDP2-204ENST00000478507 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
TDP2-204ENST00000478507 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
TDP2-204ENST00000478507 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
TDP2-204ENST00000478507 FZD9O00144 591 aa17.03■□□□□ 0.32
TDP2-204ENST00000478507 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
TDP2-204ENST00000478507 MIS18AQ9NYP9 233 aa17.03■□□□□ 0.32
TDP2-204ENST00000478507 COL4A5P29400 1685 aa17.03■□□□□ 0.32
TDP2-204ENST00000478507 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
TDP2-204ENST00000478507 CAPN15O75808 1086 aa17.02■□□□□ 0.32
TDP2-204ENST00000478507 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
TDP2-204ENST00000478507 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
TDP2-204ENST00000478507 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
TDP2-204ENST00000478507 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
TDP2-204ENST00000478507 PSMD1Q99460 953 aa17.01■□□□□ 0.31
TDP2-204ENST00000478507 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
TDP2-204ENST00000478507 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
TDP2-204ENST00000478507 HACL1Q9UJ83 578 aa17■□□□□ 0.31
TDP2-204ENST00000478507 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 UBN2Q6ZU65 1347 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
TDP2-204ENST00000478507 EPHX2P34913 555 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
TDP2-204ENST00000478507 NUTM1Q86Y26 1132 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
TDP2-204ENST00000478507 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 FOXN1O15353 648 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 TTLL7Q6ZT98 887 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 GPC2Q8N158 579 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
TDP2-204ENST00000478507 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
TDP2-204ENST00000478507 VEGFBP49765 207 aa16.97■□□□□ 0.31
TDP2-204ENST00000478507 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
TDP2-204ENST00000478507 PNMA8AQ86V59 439 aaPredicted RBP16.97■□□□□ 0.31
TDP2-204ENST00000478507 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
TDP2-204ENST00000478507 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms