RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
TRIM13-208ENST00000478111 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
TRIM13-208ENST00000478111 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
TRIM13-208ENST00000478111 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
TRIM13-208ENST00000478111 C21orf2O43822 256 aa22.27■■□□□ 1.16
TRIM13-208ENST00000478111 CNBD1Q8NA66 436 aa22.27■■□□□ 1.16
TRIM13-208ENST00000478111 HTRA3P83110 453 aa22.26■■□□□ 1.15
TRIM13-208ENST00000478111 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
TRIM13-208ENST00000478111 CLEC4GQ6UXB4 293 aa22.26■■□□□ 1.15
TRIM13-208ENST00000478111 SRGNP10124 158 aa22.25■■□□□ 1.15
TRIM13-208ENST00000478111 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-208ENST00000478111 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
TRIM13-208ENST00000478111 POTECB2RU33 542 aa22.24■■□□□ 1.15
TRIM13-208ENST00000478111 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
TRIM13-208ENST00000478111 LAMB4A4D0S4 1761 aa22.24■■□□□ 1.15
TRIM13-208ENST00000478111 VEGFAP15692 232 aaPredicted RBP22.23■■□□□ 1.15
TRIM13-208ENST00000478111 ST5P78524 1137 aa22.23■■□□□ 1.15
TRIM13-208ENST00000478111 STYK1Q6J9G0 422 aa22.23■■□□□ 1.15
TRIM13-208ENST00000478111 CNKSR1Q969H4 720 aa22.22■■□□□ 1.15
TRIM13-208ENST00000478111 PLEKHF1Q96S99 279 aa22.22■■□□□ 1.15
TRIM13-208ENST00000478111 RGL2O15211 777 aa22.21■■□□□ 1.15
TRIM13-208ENST00000478111 PRPF40BQ6NWY9 871 aaKnown RBP22.21■■□□□ 1.15
TRIM13-208ENST00000478111 NBPF5PQ86XG9 351 aaPredicted RBP22.21■■□□□ 1.15
TRIM13-208ENST00000478111 SMC1BQ8NDV3 1235 aa22.21■■□□□ 1.15
TRIM13-208ENST00000478111 MASTLQ96GX5 879 aa22.21■■□□□ 1.15
TRIM13-208ENST00000478111 LTBP3Q9NS15 1303 aa22.21■■□□□ 1.15
TRIM13-208ENST00000478111 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
TRIM13-208ENST00000478111 NPHP1O15259 732 aa22.2■■□□□ 1.14
TRIM13-208ENST00000478111 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
TRIM13-208ENST00000478111 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
TRIM13-208ENST00000478111 NUP98P52948 1817 aa22.2■■□□□ 1.14
TRIM13-208ENST00000478111 HLFQ16534 295 aa22.19■■□□□ 1.14
TRIM13-208ENST00000478111 KLRG1Q96E93 195 aa22.19■■□□□ 1.14
TRIM13-208ENST00000478111 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
TRIM13-208ENST00000478111 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
TRIM13-208ENST00000478111 NIP7Q9Y221 180 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRIM13-208ENST00000478111 EIF4A1P60842 406 aaKnown RBP22.16■■□□□ 1.14
TRIM13-208ENST00000478111 DPY19L2Q6NUT2 758 aa22.16■■□□□ 1.14
TRIM13-208ENST00000478111 TPTE2Q6XPS3 522 aa22.16■■□□□ 1.14
TRIM13-208ENST00000478111 JMYQ8N9B5 988 aa22.16■■□□□ 1.14
TRIM13-208ENST00000478111 THUMPD2Q9BTF0 503 aaKnown RBP22.16■■□□□ 1.14
TRIM13-208ENST00000478111 NPR1P16066 1061 aa22.15■■□□□ 1.14
TRIM13-208ENST00000478111 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
TRIM13-208ENST00000478111 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
TRIM13-208ENST00000478111 SOGA3Q5TF21 947 aa22.14■■□□□ 1.13
TRIM13-208ENST00000478111 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
TRIM13-208ENST00000478111 NEFMP07197 916 aa22.13■■□□□ 1.13
TRIM13-208ENST00000478111 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
TRIM13-208ENST00000478111 DDNO94850 711 aaPredicted RBP22.11■■□□□ 1.13
TRIM13-208ENST00000478111 CCDC93Q567U6 631 aa22.11■■□□□ 1.13
TRIM13-208ENST00000478111 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
TRIM13-208ENST00000478111 TTLL7Q6ZT98 887 aa22.11■■□□□ 1.13
TRIM13-208ENST00000478111 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
TRIM13-208ENST00000478111 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
TRIM13-208ENST00000478111 MAP3K15Q6ZN16 1313 aa22.09■■□□□ 1.13
TRIM13-208ENST00000478111 SCN4AP35499 1836 aa22.08■■□□□ 1.13
TRIM13-208ENST00000478111 FKBP4Q02790 459 aaKnown RBP eCLIP22.08■■□□□ 1.13
TRIM13-208ENST00000478111 PNNQ9H307 717 aaKnown RBP22.08■■□□□ 1.13
TRIM13-208ENST00000478111 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
TRIM13-208ENST00000478111 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 POTEIP0CG38 1075 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 POTEJP0CG39 1038 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 MYL6BP14649 208 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 CRY2Q49AN0 593 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 NUTM1Q86Y26 1132 aa22.07■■□□□ 1.12
TRIM13-208ENST00000478111 MAPK8IP3Q9UPT6 1336 aa22.06■■□□□ 1.12
TRIM13-208ENST00000478111 ALDH1B1P30837 517 aa22.06■■□□□ 1.12
TRIM13-208ENST00000478111 ZNF277Q9NRM2 450 aaPredicted RBP22.06■■□□□ 1.12
TRIM13-208ENST00000478111 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
TRIM13-208ENST00000478111 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
TRIM13-208ENST00000478111 LRP10Q7Z4F1 713 aa22.05■■□□□ 1.12
TRIM13-208ENST00000478111 RTKN2Q8IZC4 609 aa22.05■■□□□ 1.12
TRIM13-208ENST00000478111 L3MBTL3Q96JM7 780 aaPredicted RBP22.05■■□□□ 1.12
TRIM13-208ENST00000478111 NYXQ9GZU5 481 aa22.05■■□□□ 1.12
TRIM13-208ENST00000478111 GPTP24298 496 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 ZNF34Q8IZ26 560 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 ZBTB3Q9H5J0 574 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 ERBB4Q15303 1308 aa22.04■■□□□ 1.12
TRIM13-208ENST00000478111 IBTKQ9P2D0 1353 aaPredicted RBP22.03■■□□□ 1.12
TRIM13-208ENST00000478111 RIPK4P57078 832 aa22.03■■□□□ 1.12
TRIM13-208ENST00000478111 PDIA6Q15084 440 aa22.03■■□□□ 1.12
TRIM13-208ENST00000478111 RALBP1Q15311 655 aa22.03■■□□□ 1.12
TRIM13-208ENST00000478111 SUSD4Q5VX71 490 aa22.03■■□□□ 1.12
TRIM13-208ENST00000478111 ZNF541Q9H0D2 1346 aa22.03■■□□□ 1.12
TRIM13-208ENST00000478111 GIGYF2Q6Y7W6 1299 aaKnown RBP22.02■■□□□ 1.12
TRIM13-208ENST00000478111 SYNE4Q8N205 404 aa22.02■■□□□ 1.12
TRIM13-208ENST00000478111 TSPYL4Q9UJ04 414 aa22.02■■□□□ 1.12
TRIM13-208ENST00000478111 NTSR2O95665 410 aa22.01■■□□□ 1.11
TRIM13-208ENST00000478111 HOXA10P31260 410 aaPredicted RBP22.01■■□□□ 1.11
TRIM13-208ENST00000478111 TAF1DQ9H5J8 278 aaPredicted RBP22.01■■□□□ 1.11
TRIM13-208ENST00000478111 IQCA1LA6NCM1 817 aa22■■□□□ 1.11
TRIM13-208ENST00000478111 FZD9O00144 591 aa22■■□□□ 1.11
TRIM13-208ENST00000478111 IARSP41252 1262 aaKnown RBP22■■□□□ 1.11
TRIM13-208ENST00000478111 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
TRIM13-208ENST00000478111 COL13A1Q5TAT6 717 aaPredicted RBP22■■□□□ 1.11
TRIM13-208ENST00000478111 PSMD1Q99460 953 aa22■■□□□ 1.11
TRIM13-208ENST00000478111 COL4A5P29400 1685 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms