RNA–Protein interactions for RNA: ENST00000478037.1

REXO4-205, Transcript of REX4 homolog, 3'-5' exonuclease, human

TSL 2

Gene REXO4, Length 847 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
REXO4-205	ENST00000478037	GLTPD2	A6NH11	291 aa		33.82	■■■■□ 3
REXO4-205	ENST00000478037	CLEC4G	Q6UXB4	293 aa		33.82	■■■■□ 3
REXO4-205	ENST00000478037	CNKSR1	Q969H4	720 aa		33.82	■■■■□ 3
REXO4-205	ENST00000478037	CACNA1S	Q13698	1873 aa		33.82	■■■■□ 3
REXO4-205	ENST00000478037	WDR90	Q96KV7	1748 aa		33.82	■■■■□ 3
REXO4-205	ENST00000478037	NBPF26	B4DH59	902 aa		33.8	■■■■□ 3
REXO4-205	ENST00000478037	STYK1	Q6J9G0	422 aa		33.8	■■■■□ 3
REXO4-205	ENST00000478037	NBPF10	Q6P3W6	841 aa	Known RBP	33.8	■■■■□ 3
REXO4-205	ENST00000478037	NBPF15	Q8N660	670 aa		33.8	■■■■□ 3
REXO4-205	ENST00000478037	FAM177B	A6PVY3	158 aa		33.79	■■■■□ 3
REXO4-205	ENST00000478037	PRPF40B	Q6NWY9	871 aa	Known RBP	33.79	■■■■□ 3
REXO4-205	ENST00000478037	SMC1B	Q8NDV3	1235 aa		33.79	■■■■□ 3
REXO4-205	ENST00000478037	MASTL	Q96GX5	879 aa		33.79	■■■■□ 3
REXO4-205	ENST00000478037	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.79	■■■■□ 3
REXO4-205	ENST00000478037	DLG5	Q8TDM6	1919 aa		33.79	■■■■□ 3
REXO4-205	ENST00000478037	MAPK8IP3	Q9UPT6	1336 aa		33.79	■■■■□ 3
REXO4-205	ENST00000478037	LAMB4	A4D0S4	1761 aa		33.78	■■■■□ 3
REXO4-205	ENST00000478037	SRGN	P10124	158 aa		33.78	■■■■□ 3
REXO4-205	ENST00000478037	HTRA3	P83110	453 aa		33.78	■■■■□ 3
REXO4-205	ENST00000478037	ERFE	Q4G0M1	354 aa		33.78	■■■■□ 3
REXO4-205	ENST00000478037	VEGFA	P15692	232 aa	Predicted RBP	33.77	■■■■□ 3
REXO4-205	ENST00000478037	NGEF	Q8N5V2	710 aa		33.77	■■■■□ 3
REXO4-205	ENST00000478037	PNISR	Q8TF01	805 aa	Known RBP	33.77	■■■■□ 3
REXO4-205	ENST00000478037	TAOK3	Q9H2K8	898 aa		33.77	■■■■□ 3
REXO4-205	ENST00000478037	DPY19L2	Q6NUT2	758 aa		33.76	■■■□□ 2.99
REXO4-205	ENST00000478037	NFE2L2	Q16236	605 aa		33.75	■■■□□ 2.99
REXO4-205	ENST00000478037	FER1L6	Q2WGJ9	1857 aa		33.75	■■■□□ 2.99
REXO4-205	ENST00000478037	SOGA3	Q5TF21	947 aa		33.74	■■■□□ 2.99
REXO4-205	ENST00000478037	TPTE2	Q6XPS3	522 aa		33.74	■■■□□ 2.99
REXO4-205	ENST00000478037	THUMPD2	Q9BTF0	503 aa	Known RBP	33.74	■■■□□ 2.99
REXO4-205	ENST00000478037	SLX4	Q8IY92	1834 aa		33.74	■■■□□ 2.99
REXO4-205	ENST00000478037	KDM3B	Q7LBC6	1761 aa		33.73	■■■□□ 2.99
REXO4-205	ENST00000478037	DNAJC5G	Q8N7S2	189 aa		33.73	■■■□□ 2.99
REXO4-205	ENST00000478037	PLEKHF1	Q96S99	279 aa		33.73	■■■□□ 2.99
REXO4-205	ENST00000478037	PNN	Q9H307	717 aa	Known RBP	33.73	■■■□□ 2.99
REXO4-205	ENST00000478037	GTF2E1	P29083	439 aa	Predicted RBP	33.72	■■■□□ 2.99
REXO4-205	ENST00000478037	ARFGEF2	Q9Y6D5	1785 aa		33.71	■■■□□ 2.99
REXO4-205	ENST00000478037	HLF	Q16534	295 aa		33.71	■■■□□ 2.99
REXO4-205	ENST00000478037	IFFO2	Q5TF58	517 aa		33.71	■■■□□ 2.99
REXO4-205	ENST00000478037	LTBP3	Q9NS15	1303 aa		33.71	■■■□□ 2.99
REXO4-205	ENST00000478037	RRP7A	Q9Y3A4	280 aa	Known RBP	33.7	■■■□□ 2.99
REXO4-205	ENST00000478037	NPR1	P16066	1061 aa		33.69	■■■□□ 2.98
REXO4-205	ENST00000478037	RGL2	O15211	777 aa		33.68	■■■□□ 2.98
REXO4-205	ENST00000478037	DICER1	Q9UPY3	1922 aa	Known RBP	33.67	■■■□□ 2.98
REXO4-205	ENST00000478037	MYL6B	P14649	208 aa		33.67	■■■□□ 2.98
REXO4-205	ENST00000478037	EIF4A1	P60842	406 aa	Known RBP	33.67	■■■□□ 2.98
REXO4-205	ENST00000478037	CCDC93	Q567U6	631 aa		33.67	■■■□□ 2.98
REXO4-205	ENST00000478037	KIF6	Q6ZMV9	814 aa		33.67	■■■□□ 2.98
REXO4-205	ENST00000478037	KLRG1	Q96E93	195 aa		33.66	■■■□□ 2.98
REXO4-205	ENST00000478037	MAP3K15	Q6ZN16	1313 aa		33.62	■■■□□ 2.97
REXO4-205	ENST00000478037	NYX	Q9GZU5	481 aa		33.62	■■■□□ 2.97
REXO4-205	ENST00000478037	POTEC	B2RU33	542 aa		33.61	■■■□□ 2.97
REXO4-205	ENST00000478037	DDN	O94850	711 aa	Predicted RBP	33.61	■■■□□ 2.97
REXO4-205	ENST00000478037	TTLL7	Q6ZT98	887 aa		33.61	■■■□□ 2.97
REXO4-205	ENST00000478037	ZBTB3	Q9H5J0	574 aa		33.61	■■■□□ 2.97
REXO4-205	ENST00000478037	TSPYL4	Q9UJ04	414 aa		33.61	■■■□□ 2.97
REXO4-205	ENST00000478037	ERVV-1	B6SEH8	477 aa		33.6	■■■□□ 2.97
REXO4-205	ENST00000478037	NUTM1	Q86Y26	1132 aa		33.6	■■■□□ 2.97
REXO4-205	ENST00000478037	KLRG2	A4D1S0	409 aa	Predicted RBP	33.59	■■■□□ 2.97
REXO4-205	ENST00000478037	GPT	P24298	496 aa		33.59	■■■□□ 2.97
REXO4-205	ENST00000478037	RALBP1	Q15311	655 aa		33.59	■■■□□ 2.97
REXO4-205	ENST00000478037	ALDH1B1	P30837	517 aa		33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	RIPK4	P57078	832 aa		33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	OLFM4	Q6UX06	510 aa		33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	C7orf43	Q8WVR3	580 aa		33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	ABCC12	Q96J65	1359 aa		33.58	■■■□□ 2.97
REXO4-205	ENST00000478037	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.57	■■■□□ 2.96
REXO4-205	ENST00000478037	NUP98	P52948	1817 aa		33.56	■■■□□ 2.96
REXO4-205	ENST00000478037	RTKN2	Q8IZC4	609 aa		33.55	■■■□□ 2.96
REXO4-205	ENST00000478037	EIF2S2	P20042	333 aa	Known RBP	33.54	■■■□□ 2.96
REXO4-205	ENST00000478037	RPGR	Q92834	1020 aa	Known RBP	33.53	■■■□□ 2.96
REXO4-205	ENST00000478037	LMOD3	Q0VAK6	560 aa		33.52	■■■□□ 2.96
REXO4-205	ENST00000478037	DDX10	Q13206	875 aa	Known RBP	33.52	■■■□□ 2.96
REXO4-205	ENST00000478037	ERBB4	Q15303	1308 aa		33.52	■■■□□ 2.96
REXO4-205	ENST00000478037	UBN2	Q6ZU65	1347 aa		33.52	■■■□□ 2.96
REXO4-205	ENST00000478037	JMY	Q8N9B5	988 aa		33.51	■■■□□ 2.95
REXO4-205	ENST00000478037	IQCA1L	A6NCM1	817 aa		33.5	■■■□□ 2.95
REXO4-205	ENST00000478037	TMPO	P42166	694 aa	Known RBP	33.49	■■■□□ 2.95
REXO4-205	ENST00000478037	NEUROD2	Q15784	382 aa		33.49	■■■□□ 2.95
REXO4-205	ENST00000478037	SUSD4	Q5VX71	490 aa		33.49	■■■□□ 2.95
REXO4-205	ENST00000478037	CHADL	Q6NUI6	762 aa		33.49	■■■□□ 2.95
REXO4-205	ENST00000478037	ZNF541	Q9H0D2	1346 aa		33.49	■■■□□ 2.95
REXO4-205	ENST00000478037	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	POTEI	P0CG38	1075 aa		33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	POTEJ	P0CG39	1038 aa		33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	CRY2	Q49AN0	593 aa		33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	CCDC146	Q8IYE0	955 aa		33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	SYNE4	Q8N205	404 aa		33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.48	■■■□□ 2.95
REXO4-205	ENST00000478037	IARS	P41252	1262 aa	Known RBP	33.47	■■■□□ 2.95
REXO4-205	ENST00000478037	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.47	■■■□□ 2.95
REXO4-205	ENST00000478037	PPP1R42	Q7Z4L9	355 aa		33.46	■■■□□ 2.95
REXO4-205	ENST00000478037	NECTIN2	Q92692	538 aa		33.46	■■■□□ 2.95
REXO4-205	ENST00000478037	ANXA1	P04083	346 aa		33.45	■■■□□ 2.95
REXO4-205	ENST00000478037	ZNF34	Q8IZ26	560 aa		33.45	■■■□□ 2.95
REXO4-205	ENST00000478037	NTSR2	O95665	410 aa		33.44	■■■□□ 2.94
REXO4-205	ENST00000478037	WDR43	Q15061	677 aa	Known RBP eCLIP	33.44	■■■□□ 2.94
REXO4-205	ENST00000478037	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.44	■■■□□ 2.94
REXO4-205	ENST00000478037	TCERG1	O14776	1098 aa	Known RBP	33.43	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms