RNA–Protein interactions for RNA: ENST00000477778.5

NECAB3-206, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-206ENST00000477778 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
NECAB3-206ENST00000477778 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
NECAB3-206ENST00000477778 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
NECAB3-206ENST00000477778 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
NECAB3-206ENST00000477778 PRAMEF22A3QJZ6 481 aa16.22■□□□□ 0.19
NECAB3-206ENST00000477778 KLRG2A4D1S0 409 aaPredicted RBP16.22■□□□□ 0.19
NECAB3-206ENST00000477778 PIP4K2AP48426 406 aaPredicted RBP16.22■□□□□ 0.19
NECAB3-206ENST00000477778 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
NECAB3-206ENST00000477778 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
NECAB3-206ENST00000477778 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
NECAB3-206ENST00000477778 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
NECAB3-206ENST00000477778 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
NECAB3-206ENST00000477778 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
NECAB3-206ENST00000477778 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
NECAB3-206ENST00000477778 COL4A5P29400 1685 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 VEGFBP49765 207 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
NECAB3-206ENST00000477778 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 PCGF6Q9BYE7 350 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
NECAB3-206ENST00000477778 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
NECAB3-206ENST00000477778 TEFQ10587 303 aa16.18■□□□□ 0.18
NECAB3-206ENST00000477778 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
NECAB3-206ENST00000477778 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
NECAB3-206ENST00000477778 WBP1LQ9NX94 342 aa16.18■□□□□ 0.18
NECAB3-206ENST00000477778 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
NECAB3-206ENST00000477778 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
NECAB3-206ENST00000477778 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
NECAB3-206ENST00000477778 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
NECAB3-206ENST00000477778 ST5P78524 1137 aa16.16■□□□□ 0.18
NECAB3-206ENST00000477778 FKBP4Q02790 459 aaKnown RBP eCLIP16.16■□□□□ 0.18
NECAB3-206ENST00000477778 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
NECAB3-206ENST00000477778 CLEC4GQ6UXB4 293 aa16.16■□□□□ 0.18
NECAB3-206ENST00000477778 RSPH6AQ9H0K4 717 aa16.16■□□□□ 0.18
NECAB3-206ENST00000477778 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
NECAB3-206ENST00000477778 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
NECAB3-206ENST00000477778 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
NECAB3-206ENST00000477778 RASSF10A6NK89 507 aa16.14■□□□□ 0.17
NECAB3-206ENST00000477778 TMEM88BA6NKF7 163 aa16.14■□□□□ 0.17
NECAB3-206ENST00000477778 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
NECAB3-206ENST00000477778 FZD9O00144 591 aa16.14■□□□□ 0.17
NECAB3-206ENST00000477778 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
NECAB3-206ENST00000477778 NPR1P16066 1061 aa16.14■□□□□ 0.17
NECAB3-206ENST00000477778 HLFQ16534 295 aa16.13■□□□□ 0.17
NECAB3-206ENST00000477778 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
NECAB3-206ENST00000477778 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
NECAB3-206ENST00000477778 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 HSPA8P11142 646 aaKnown RBP16.12■□□□□ 0.17
NECAB3-206ENST00000477778 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 EPHX2P34913 555 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
NECAB3-206ENST00000477778 LBX1P52954 281 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
NECAB3-206ENST00000477778 RGL2O15211 777 aa16.11■□□□□ 0.17
NECAB3-206ENST00000477778 FMR1Q06787 632 aaKnown RBP eCLIP16.11■□□□□ 0.17
NECAB3-206ENST00000477778 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
NECAB3-206ENST00000477778 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
NECAB3-206ENST00000477778 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
NECAB3-206ENST00000477778 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
NECAB3-206ENST00000477778 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
NECAB3-206ENST00000477778 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
NECAB3-206ENST00000477778 NIP7Q9Y221 180 aaKnown RBP eCLIP16.1■□□□□ 0.17
NECAB3-206ENST00000477778 NUP98P52948 1817 aa16.1■□□□□ 0.17
NECAB3-206ENST00000477778 DCTN1Q14203 1278 aa16.09■□□□□ 0.17
NECAB3-206ENST00000477778 CRY2Q49AN0 593 aa16.09■□□□□ 0.17
NECAB3-206ENST00000477778 MCM10Q7L590 875 aa16.09■□□□□ 0.17
NECAB3-206ENST00000477778 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
NECAB3-206ENST00000477778 NPHP1O15259 732 aa16.08■□□□□ 0.16
NECAB3-206ENST00000477778 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
NECAB3-206ENST00000477778 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
NECAB3-206ENST00000477778 GPC2Q8N158 579 aa16.08■□□□□ 0.16
NECAB3-206ENST00000477778 FAM177BA6PVY3 158 aa16.07■□□□□ 0.16
NECAB3-206ENST00000477778 SCNN1DP51172 638 aa16.07■□□□□ 0.16
NECAB3-206ENST00000477778 DEFB115Q30KQ5 88 aa16.07■□□□□ 0.16
NECAB3-206ENST00000477778 PSMD1Q99460 953 aa16.07■□□□□ 0.16
NECAB3-206ENST00000477778 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
NECAB3-206ENST00000477778 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
NECAB3-206ENST00000477778 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
NECAB3-206ENST00000477778 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
NECAB3-206ENST00000477778 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
NECAB3-206ENST00000477778 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
NECAB3-206ENST00000477778 ZNF652Q9Y2D9 606 aa16.06■□□□□ 0.16
NECAB3-206ENST00000477778 TRPM7Q96QT4 1865 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 SLC34A2O95436 690 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 CST9Q5W186 159 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
NECAB3-206ENST00000477778 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 ABHD8Q96I13 439 aa16.05■□□□□ 0.16
NECAB3-206ENST00000477778 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
NECAB3-206ENST00000477778 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms