RNA–Protein interactions for RNA: ENST00000477715.5

SPATA9-205, Transcript of spermatogenesis associated 9, humanhuman

TSL 2

Gene SPATA9, Length 2,169 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-205ENST00000477715 DCTN4Q9UJW0 460 aa10.59□□□□□ -0.71
SPATA9-205ENST00000477715 NUB1Q9Y5A7 615 aa10.59□□□□□ -0.71
SPATA9-205ENST00000477715 PRDM15P57071 1507 aaPredicted RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 POU5F1BQ06416 359 aa10.58□□□□□ -0.72
SPATA9-205ENST00000477715 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
SPATA9-205ENST00000477715 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
SPATA9-205ENST00000477715 COL17A1Q9UMD9 1497 aaPredicted RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 GNL2Q13823 731 aaKnown RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 CCSAPQ6IQ19 270 aaPredicted RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.58□□□□□ -0.72
SPATA9-205ENST00000477715 KANSL2Q9H9L4 492 aa10.58□□□□□ -0.72
SPATA9-205ENST00000477715 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
SPATA9-205ENST00000477715 SCP2P22307 547 aa10.57□□□□□ -0.72
SPATA9-205ENST00000477715 TERF1P54274 439 aa10.57□□□□□ -0.72
SPATA9-205ENST00000477715 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
SPATA9-205ENST00000477715 DDX46Q7L014 1031 aaKnown RBP10.57□□□□□ -0.72
SPATA9-205ENST00000477715 MRFAP1L1Q96HT8 127 aa10.57□□□□□ -0.72
SPATA9-205ENST00000477715 GEMIN8Q9NWZ8 242 aaKnown RBP10.57□□□□□ -0.72
SPATA9-205ENST00000477715 PLCH2O75038 1416 aa10.57□□□□□ -0.72
SPATA9-205ENST00000477715 MYO5CQ9NQX4 1742 aa10.57□□□□□ -0.72
SPATA9-205ENST00000477715 TCERG1O14776 1098 aaKnown RBP10.56□□□□□ -0.72
SPATA9-205ENST00000477715 RGS20O76081 388 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 ANP32AP39687 249 aaKnown RBP10.56□□□□□ -0.72
SPATA9-205ENST00000477715 GLYCTKQ8IVS8 523 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 NEURL4Q96JN8 1562 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 APBA2Q99767 749 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 RSPH9Q9H1X1 276 aaPredicted RBP10.56□□□□□ -0.72
SPATA9-205ENST00000477715 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 PUF60Q9UHX1 559 aaKnown RBP10.56□□□□□ -0.72
SPATA9-205ENST00000477715 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L15C9J2P7 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L13C9JLJ4 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L12C9JPN9 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L11C9JVI0 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L21D6R901 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L18D6R9N7 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L22D6RA61 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L17D6RBQ6 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L19D6RCP7 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L20D6RJB6 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L24Q0WX57 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 MTMR3Q13615 1198 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 ZNF394Q53GI3 561 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 LRRC27Q9C0I9 530 aa10.56□□□□□ -0.72
SPATA9-205ENST00000477715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
SPATA9-205ENST00000477715 SYCP2Q9BX26 1530 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 FGRP09769 529 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 KCTD2Q14681 263 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 EPS8L1Q8TE68 723 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 MUC3BQ9H195 1237 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 ZHX3Q9H4I2 956 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 TIMM44O43615 452 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 NGDNQ8NEJ9 315 aaKnown RBP10.55□□□□□ -0.72
SPATA9-205ENST00000477715 SVIPQ8NHG7 77 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
SPATA9-205ENST00000477715 A2MP01023 1474 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 ICMTO60725 284 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 LILRB3O75022 631 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 ZNF76P36508 570 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
SPATA9-205ENST00000477715 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 NPDC1Q9NQX5 325 aaPredicted RBP10.54□□□□□ -0.72
SPATA9-205ENST00000477715 TYW1Q9NV66 732 aaKnown RBP10.54□□□□□ -0.72
SPATA9-205ENST00000477715 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
SPATA9-205ENST00000477715 SETD1BQ9UPS6 1966 aaKnown RBP10.54□□□□□ -0.72
SPATA9-205ENST00000477715 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 DYTNA2CJ06 578 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 PER1O15534 1290 aaPredicted RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 RACK1P63244 317 aaKnown RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 SOGA3Q5TF21 947 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 CDC5LQ99459 802 aaKnown RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 WDR7Q9Y4E6 1490 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 EIF3AQ14152 1382 aaKnown RBP10.53□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L3A6NCW0 530 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L4A6NCW7 530 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 MAN1A1P33908 653 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 USP17L1Q7RTZ2 530 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 FRMD6Q96NE9 622 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
SPATA9-205ENST00000477715 PLA2R1Q13018 1463 aa10.52□□□□□ -0.72
SPATA9-205ENST00000477715 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.72
SPATA9-205ENST00000477715 LRRC41Q15345 812 aa10.52□□□□□ -0.72
SPATA9-205ENST00000477715 LONRF1Q17RB8 773 aa10.52□□□□□ -0.72
SPATA9-205ENST00000477715 KANK3Q6NY19 840 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms