RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZNF397Q8NF99 534 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 SGSM3Q96HU1 749 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 CWC15Q9P013 229 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 A0A1B0GUL7 405 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 KIF3CO14782 793 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 PPP1R12AO14974 1030 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 TPM3P06753 285 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 ATF3P18847 181 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 SUFUQ9UMX1 484 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 CCDC189A1A4V9 331 aa15.1■□□□□ 0.01
RTFDC1-207ENST00000477573 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
RTFDC1-207ENST00000477573 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
RTFDC1-207ENST00000477573 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
RTFDC1-207ENST00000477573 DCCP43146 1447 aa15.1■□□□□ 0.01
RTFDC1-207ENST00000477573 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 EYA1Q99502 592 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 LMBRD1Q9NUN5 540 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 FOXO3O43524 673 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 FAM184AQ8NB25 1140 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
RTFDC1-207ENST00000477573 SMTNL1A8MU46 457 aa15.08■□□□□ 0.01
RTFDC1-207ENST00000477573 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0.01
RTFDC1-207ENST00000477573 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0.01
RTFDC1-207ENST00000477573 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0
RTFDC1-207ENST00000477573 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
RTFDC1-207ENST00000477573 IP6K1Q92551 441 aa15.08■□□□□ 0
RTFDC1-207ENST00000477573 PSMD1Q99460 953 aa15.08■□□□□ 0
RTFDC1-207ENST00000477573 LTN1O94822 1766 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 TMEM94Q12767 1356 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 FAM83GA6ND36 823 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 SSFA2P28290 1259 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 TEX35Q5T0J7 233 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 SUGP1Q8IWZ8 645 aaKnown RBP15.07■□□□□ 0
RTFDC1-207ENST00000477573 KIAA1524Q8TCG1 905 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 ATG3Q9NT62 314 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 ZNF446Q9NWS9 450 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 NFAT5O94916 1531 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 RLBP1P12271 317 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 NUCB2P80303 420 aa15.07■□□□□ 0
RTFDC1-207ENST00000477573 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
RTFDC1-207ENST00000477573 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
RTFDC1-207ENST00000477573 VAMP4O75379 141 aa15.06■□□□□ 0
RTFDC1-207ENST00000477573 LRCH2Q5VUJ6 765 aa15.06■□□□□ 0
RTFDC1-207ENST00000477573 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
RTFDC1-207ENST00000477573 C10orf67Q8IYJ2 551 aa15.06■□□□□ 0
RTFDC1-207ENST00000477573 OTUD6BQ8N6M0 293 aa15.06■□□□□ 0
RTFDC1-207ENST00000477573 TRIM27P14373 513 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 ATP6V1AP38606 617 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 DCTN1Q14203 1278 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ 0
RTFDC1-207ENST00000477573 SYT10Q6XYQ8 523 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 CADPS2Q86UW7 1296 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 DDX19BQ9UMR2 479 aa15.05■□□□□ 0
RTFDC1-207ENST00000477573 MTHFSDQ2M296 383 aaKnown RBP15.05■□□□□ -0
RTFDC1-207ENST00000477573 TOMM22Q9NS69 142 aa15.05■□□□□ -0
RTFDC1-207ENST00000477573 PHRF1Q9P1Y6 1649 aaKnown RBP15.04■□□□□ -0
RTFDC1-207ENST00000477573 HSPA2P54652 639 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 TTC31Q49AM3 519 aaPredicted RBP15.04■□□□□ -0
RTFDC1-207ENST00000477573 ARHGAP45Q92619 1136 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 PAXBP1Q9Y5B6 917 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 K7ELQ4 463 aaPredicted RBP15.04■□□□□ -0
RTFDC1-207ENST00000477573 CHL1O00533 1208 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 MBD3O95983 291 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 JMYQ8N9B5 988 aa15.04■□□□□ -0
RTFDC1-207ENST00000477573 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
RTFDC1-207ENST00000477573 SLIT3O75094 1523 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 GCP02774 474 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 GYS2P54840 703 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 RABEP1Q15276 862 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 MCTP1Q6DN14 999 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 MCM10Q7L590 875 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 NFATC2IPQ8NCF5 419 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 DRC1Q96MC2 740 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 TSPY26PQ9H489 355 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 TNNQ9UQP3 1299 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 MST1RQ04912 1400 aa15.03■□□□□ -0
RTFDC1-207ENST00000477573 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
RTFDC1-207ENST00000477573 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 C11orf91Q3C1V1 193 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 SRLQ86TD4 932 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 CEP89Q96ST8 783 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 MSH6P52701 1360 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 STRCP1A6NGW2 1772 aa15.02■□□□□ -0
RTFDC1-207ENST00000477573 KIAA0232Q92628 1395 aa15.02□□□□□ -0.01
RTFDC1-207ENST00000477573 KLHL33A6NCF5 533 aa15.02□□□□□ -0.01
RTFDC1-207ENST00000477573 BMS1Q14692 1282 aaKnown RBP15.02□□□□□ -0.01
RTFDC1-207ENST00000477573 TSGA10IPQ3SY00 556 aa15.02□□□□□ -0.01
RTFDC1-207ENST00000477573 RWDD1Q9H446 243 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms