RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PDIA6Q15084 440 aa19.66■□□□□ 0.74
SEC13-215ENST00000477547 ZNF428Q96B54 188 aa19.66■□□□□ 0.74
SEC13-215ENST00000477547 ADRA2BP18089 450 aa19.65■□□□□ 0.74
SEC13-215ENST00000477547 EIF5P55010 431 aaKnown RBP19.65■□□□□ 0.74
SEC13-215ENST00000477547 SMIM5Q71RC9 77 aa19.65■□□□□ 0.74
SEC13-215ENST00000477547 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
SEC13-215ENST00000477547 BCL2L13Q9BXK5 485 aa19.64■□□□□ 0.73
SEC13-215ENST00000477547 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
SEC13-215ENST00000477547 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
SEC13-215ENST00000477547 LRP10Q7Z4F1 713 aa19.63■□□□□ 0.73
SEC13-215ENST00000477547 MSH5O43196 834 aa19.62■□□□□ 0.73
SEC13-215ENST00000477547 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
SEC13-215ENST00000477547 FLAD1Q8NFF5 587 aa19.62■□□□□ 0.73
SEC13-215ENST00000477547 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
SEC13-215ENST00000477547 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
SEC13-215ENST00000477547 A0A087WZG4 1122 aa19.61■□□□□ 0.73
SEC13-215ENST00000477547 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
SEC13-215ENST00000477547 RARSP54136 660 aaKnown RBP19.61■□□□□ 0.73
SEC13-215ENST00000477547 TRAPPC3LQ5T215 181 aa19.61■□□□□ 0.73
SEC13-215ENST00000477547 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
SEC13-215ENST00000477547 DZIP3Q86Y13 1208 aaKnown RBP19.61■□□□□ 0.73
SEC13-215ENST00000477547 XAGE3Q8WTP9 111 aa19.61■□□□□ 0.73
SEC13-215ENST00000477547 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
SEC13-215ENST00000477547 USP42Q9H9J4 1324 aaKnown RBP19.6■□□□□ 0.73
SEC13-215ENST00000477547 HSPA6P17066 643 aa19.6■□□□□ 0.73
SEC13-215ENST00000477547 RFC4P35249 363 aa19.6■□□□□ 0.73
SEC13-215ENST00000477547 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
SEC13-215ENST00000477547 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
SEC13-215ENST00000477547 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
SEC13-215ENST00000477547 AIMP1Q12904 312 aaKnown RBP19.59■□□□□ 0.73
SEC13-215ENST00000477547 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
SEC13-215ENST00000477547 PHAXQ9H814 394 aaKnown RBP19.59■□□□□ 0.73
SEC13-215ENST00000477547 KIF16BQ96L93 1317 aa19.58■□□□□ 0.73
SEC13-215ENST00000477547 FLIIQ13045 1269 aa19.58■□□□□ 0.73
SEC13-215ENST00000477547 COPS6Q7L5N1 327 aa19.58■□□□□ 0.73
SEC13-215ENST00000477547 G2E3Q7L622 706 aa19.58■□□□□ 0.73
SEC13-215ENST00000477547 MRPL50Q8N5N7 158 aaKnown RBP19.58■□□□□ 0.73
SEC13-215ENST00000477547 SRP68Q9UHB9 627 aaKnown RBP19.58■□□□□ 0.73
SEC13-215ENST00000477547 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.73
SEC13-215ENST00000477547 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
SEC13-215ENST00000477547 ZBTB3Q9H5J0 574 aa19.57■□□□□ 0.72
SEC13-215ENST00000477547 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
SEC13-215ENST00000477547 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
SEC13-215ENST00000477547 ZPR1O75312 459 aa19.56■□□□□ 0.72
SEC13-215ENST00000477547 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
SEC13-215ENST00000477547 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
SEC13-215ENST00000477547 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
SEC13-215ENST00000477547 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
SEC13-215ENST00000477547 ADCY9O60503 1353 aa19.55■□□□□ 0.72
SEC13-215ENST00000477547 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
SEC13-215ENST00000477547 BCAR3O75815 825 aa19.54■□□□□ 0.72
SEC13-215ENST00000477547 ZNF652Q9Y2D9 606 aa19.54■□□□□ 0.72
SEC13-215ENST00000477547 PTPRCP08575 1304 aa19.54■□□□□ 0.72
SEC13-215ENST00000477547 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
SEC13-215ENST00000477547 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
SEC13-215ENST00000477547 LAMB2P55268 1798 aa19.53■□□□□ 0.72
SEC13-215ENST00000477547 GYS1P13807 737 aa19.52■□□□□ 0.72
SEC13-215ENST00000477547 BRPF1P55201 1214 aaPredicted RBP19.52■□□□□ 0.72
SEC13-215ENST00000477547 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
SEC13-215ENST00000477547 NRXN2Q9P2S2 1712 aa19.52■□□□□ 0.72
SEC13-215ENST00000477547 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 ANKRD13DQ6ZTN6 518 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 PI4KAP2A4QPH2 592 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 RGL2O15211 777 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 HLFQ16534 295 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 KSR2Q6VAB6 950 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 GIGYF2Q6Y7W6 1299 aaKnown RBP19.51■□□□□ 0.71
SEC13-215ENST00000477547 PI4KAP1Q8N8J0 262 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
SEC13-215ENST00000477547 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
SEC13-215ENST00000477547 MAP3K2Q9Y2U5 619 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 CD2APQ9Y5K6 639 aa19.51■□□□□ 0.71
SEC13-215ENST00000477547 FKBP8Q14318 412 aa19.5■□□□□ 0.71
SEC13-215ENST00000477547 DNAAF4Q8WXU2 420 aa19.49■□□□□ 0.71
SEC13-215ENST00000477547 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
SEC13-215ENST00000477547 MYH3P11055 1940 aa19.48■□□□□ 0.71
SEC13-215ENST00000477547 F6X3S4 739 aa19.48■□□□□ 0.71
SEC13-215ENST00000477547 HSP90AB3PQ58FF7 597 aa19.48■□□□□ 0.71
SEC13-215ENST00000477547 CLEC4GQ6UXB4 293 aa19.48■□□□□ 0.71
SEC13-215ENST00000477547 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
SEC13-215ENST00000477547 DDX60Q8IY21 1712 aaKnown RBP19.47■□□□□ 0.71
SEC13-215ENST00000477547 KIF3CO14782 793 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
SEC13-215ENST00000477547 GPTP24298 496 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 MYD88Q99836 296 aa19.47■□□□□ 0.71
SEC13-215ENST00000477547 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
SEC13-215ENST00000477547 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
SEC13-215ENST00000477547 NFIXQ14938 502 aa19.46■□□□□ 0.71
SEC13-215ENST00000477547 METTL22Q9BUU2 404 aaPredicted RBP19.46■□□□□ 0.71
SEC13-215ENST00000477547 NIP7Q9Y221 180 aaKnown RBP eCLIP19.46■□□□□ 0.71
SEC13-215ENST00000477547 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
SEC13-215ENST00000477547 UBN2Q6ZU65 1347 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 TRIM27P14373 513 aa19.45■□□□□ 0.7
SEC13-215ENST00000477547 TCIRG1Q13488 830 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms