RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 AIMP1Q12904 312 aaKnown RBP21.52■■□□□ 1.04
EPHB4-204ENST00000477446 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
EPHB4-204ENST00000477446 G2E3Q7L622 706 aa21.52■■□□□ 1.04
EPHB4-204ENST00000477446 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
EPHB4-204ENST00000477446 CASZ1Q86V15 1759 aa21.5■■□□□ 1.03
EPHB4-204ENST00000477446 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
EPHB4-204ENST00000477446 SRP68Q9UHB9 627 aaKnown RBP21.5■■□□□ 1.03
EPHB4-204ENST00000477446 NARFQ9UHQ1 456 aa21.5■■□□□ 1.03
EPHB4-204ENST00000477446 USP42Q9H9J4 1324 aaKnown RBP21.49■■□□□ 1.03
EPHB4-204ENST00000477446 BCORQ6W2J9 1755 aa21.49■■□□□ 1.03
EPHB4-204ENST00000477446 ZPR1O75312 459 aa21.48■■□□□ 1.03
EPHB4-204ENST00000477446 USPL1Q5W0Q7 1092 aa21.48■■□□□ 1.03
EPHB4-204ENST00000477446 KIF6Q6ZMV9 814 aa21.48■■□□□ 1.03
EPHB4-204ENST00000477446 CAMTA2O94983 1202 aa21.48■■□□□ 1.03
EPHB4-204ENST00000477446 FLIIQ13045 1269 aa21.48■■□□□ 1.03
EPHB4-204ENST00000477446 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 BCAR3O75815 825 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 B4GALNT3Q6L9W6 998 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 BCL2L12Q9HB09 334 aa21.47■■□□□ 1.03
EPHB4-204ENST00000477446 GYS1P13807 737 aa21.46■■□□□ 1.03
EPHB4-204ENST00000477446 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
EPHB4-204ENST00000477446 NUP98P52948 1817 aa21.46■■□□□ 1.03
EPHB4-204ENST00000477446 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
EPHB4-204ENST00000477446 BRPF1P55201 1214 aaPredicted RBP21.45■■□□□ 1.02
EPHB4-204ENST00000477446 HLFQ16534 295 aa21.45■■□□□ 1.02
EPHB4-204ENST00000477446 ANKRD13DQ6ZTN6 518 aa21.45■■□□□ 1.02
EPHB4-204ENST00000477446 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
EPHB4-204ENST00000477446 PLBD2Q8NHP8 589 aa21.45■■□□□ 1.02
EPHB4-204ENST00000477446 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
EPHB4-204ENST00000477446 DDX58O95786 925 aaKnown RBP21.44■■□□□ 1.02
EPHB4-204ENST00000477446 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
EPHB4-204ENST00000477446 ARFGEF2Q9Y6D5 1785 aa21.43■■□□□ 1.02
EPHB4-204ENST00000477446 RIC3Q7Z5B4 369 aa21.43■■□□□ 1.02
EPHB4-204ENST00000477446 PI4KAP2A4QPH2 592 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 MSL1Q68DK7 614 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 KSR2Q6VAB6 950 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 GIGYF2Q6Y7W6 1299 aaKnown RBP21.42■■□□□ 1.02
EPHB4-204ENST00000477446 PI4KAP1Q8N8J0 262 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 NOB1Q9ULX3 412 aaKnown RBP21.42■■□□□ 1.02
EPHB4-204ENST00000477446 ADCY9O60503 1353 aa21.42■■□□□ 1.02
EPHB4-204ENST00000477446 RGL2O15211 777 aa21.41■■□□□ 1.02
EPHB4-204ENST00000477446 NLGN1Q8N2Q7 840 aa21.41■■□□□ 1.02
EPHB4-204ENST00000477446 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
EPHB4-204ENST00000477446 PTPRCP08575 1304 aa21.41■■□□□ 1.02
EPHB4-204ENST00000477446 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
EPHB4-204ENST00000477446 KIF16BQ96L93 1317 aa21.4■■□□□ 1.02
EPHB4-204ENST00000477446 TBC1D9BQ66K14 1250 aa21.4■■□□□ 1.02
EPHB4-204ENST00000477446 MTFR1LQ9H019 292 aa21.4■■□□□ 1.02
EPHB4-204ENST00000477446 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.01
EPHB4-204ENST00000477446 ATF5Q9Y2D1 282 aaPredicted RBP21.39■■□□□ 1.01
EPHB4-204ENST00000477446 ANKRD36CQ5JPF3 1778 aa21.39■■□□□ 1.01
EPHB4-204ENST00000477446 COL24A1Q17RW2 1714 aa21.38■■□□□ 1.01
EPHB4-204ENST00000477446 F6X3S4 739 aa21.38■■□□□ 1.01
EPHB4-204ENST00000477446 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
EPHB4-204ENST00000477446 TM4SF1P30408 202 aa21.37■■□□□ 1.01
EPHB4-204ENST00000477446 TCIRG1Q13488 830 aa21.37■■□□□ 1.01
EPHB4-204ENST00000477446 NFIXQ14938 502 aa21.37■■□□□ 1.01
EPHB4-204ENST00000477446 DNAAF4Q8WXU2 420 aa21.37■■□□□ 1.01
EPHB4-204ENST00000477446 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
EPHB4-204ENST00000477446 ATP10DQ9P241 1426 aa21.37■■□□□ 1.01
EPHB4-204ENST00000477446 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 ZNF34Q8IZ26 560 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 NIP7Q9Y221 180 aaKnown RBP eCLIP21.36■■□□□ 1.01
EPHB4-204ENST00000477446 IPO8O15397 1037 aaKnown RBP21.36■■□□□ 1.01
EPHB4-204ENST00000477446 GPTP24298 496 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 MYD88Q99836 296 aa21.36■■□□□ 1.01
EPHB4-204ENST00000477446 MMP10P09238 476 aa21.35■■□□□ 1.01
EPHB4-204ENST00000477446 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
EPHB4-204ENST00000477446 ATP5J2-PTCD1G3V325 749 aa21.34■■□□□ 1.01
EPHB4-204ENST00000477446 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
EPHB4-204ENST00000477446 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
EPHB4-204ENST00000477446 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
EPHB4-204ENST00000477446 UBN2Q6ZU65 1347 aa21.34■■□□□ 1.01
EPHB4-204ENST00000477446 TRIM27P14373 513 aa21.33■■□□□ 1.01
EPHB4-204ENST00000477446 DDR1Q08345 913 aa21.33■■□□□ 1.01
EPHB4-204ENST00000477446 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
EPHB4-204ENST00000477446 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
EPHB4-204ENST00000477446 POLRMTO00411 1230 aaKnown RBP21.32■■□□□ 1
EPHB4-204ENST00000477446 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
EPHB4-204ENST00000477446 SGIP1Q9BQI5 828 aa21.32■■□□□ 1
EPHB4-204ENST00000477446 SPON1Q9HCB6 807 aa21.32■■□□□ 1
EPHB4-204ENST00000477446 TNNQ9UQP3 1299 aa21.32■■□□□ 1
EPHB4-204ENST00000477446 AFDNP55196 1824 aaKnown RBP21.32■■□□□ 1
EPHB4-204ENST00000477446 IGKV5-2P06315 115 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 PTGER2P43116 358 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 TRIM28Q13263 835 aaKnown RBP21.31■■□□□ 1
EPHB4-204ENST00000477446 NLRP10Q86W26 655 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 CARMIL3Q8ND23 1372 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 PLIN1O60240 522 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
EPHB4-204ENST00000477446 PARP10Q53GL7 1025 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 BEND3Q5T5X7 828 aa21.31■■□□□ 1
EPHB4-204ENST00000477446 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
EPHB4-204ENST00000477446 PARP3Q9Y6F1 533 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms