RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 CNKSR1Q969H4 720 aa10.18□□□□□ -0.78
PRPF3-205ENST00000476970 CAPNS2Q96L46 248 aa10.18□□□□□ -0.78
PRPF3-205ENST00000476970 BRIP1Q9BX63 1249 aa10.18□□□□□ -0.78
PRPF3-205ENST00000476970 MCOLN1Q9GZU1 580 aa10.18□□□□□ -0.78
PRPF3-205ENST00000476970 ABCB7O75027 752 aa10.17□□□□□ -0.78
PRPF3-205ENST00000476970 EIF4A2Q14240 407 aaKnown RBP10.17□□□□□ -0.78
PRPF3-205ENST00000476970 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
PRPF3-205ENST00000476970 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
PRPF3-205ENST00000476970 A0A087WZG4 1122 aa10.16□□□□□ -0.78
PRPF3-205ENST00000476970 NPHP1O15259 732 aa10.16□□□□□ -0.78
PRPF3-205ENST00000476970 PRPF38BQ5VTL8 546 aaKnown RBP10.16□□□□□ -0.78
PRPF3-205ENST00000476970 MAP1SQ66K74 1059 aaPredicted RBP10.16□□□□□ -0.78
PRPF3-205ENST00000476970 STYK1Q6J9G0 422 aa10.16□□□□□ -0.78
PRPF3-205ENST00000476970 GPR101Q96P66 508 aaPredicted RBP10.16□□□□□ -0.78
PRPF3-205ENST00000476970 DDX21Q9NR30 783 aaKnown RBP eCLIP10.16□□□□□ -0.78
PRPF3-205ENST00000476970 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.78
PRPF3-205ENST00000476970 MAP2K2P36507 400 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 GRM1Q13255 1194 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 CCDC93Q567U6 631 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 PRPF40BQ6NWY9 871 aaKnown RBP10.15□□□□□ -0.78
PRPF3-205ENST00000476970 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 ZBTB1Q9Y2K1 713 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 MRC1P22897 1456 aa10.15□□□□□ -0.78
PRPF3-205ENST00000476970 BCORQ6W2J9 1755 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 UBR2Q8IWV8 1755 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 ST5P78524 1137 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 DGKZQ13574 1117 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 CNBD1Q8NA66 436 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 MASTLQ96GX5 879 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 FOXD4L1Q9NU39 408 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
PRPF3-205ENST00000476970 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
PRPF3-205ENST00000476970 FKBP4Q02790 459 aaKnown RBP eCLIP10.13□□□□□ -0.79
PRPF3-205ENST00000476970 CYP4F22Q6NT55 531 aa10.13□□□□□ -0.79
PRPF3-205ENST00000476970 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
PRPF3-205ENST00000476970 GPC2Q8N158 579 aa10.13□□□□□ -0.79
PRPF3-205ENST00000476970 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
PRPF3-205ENST00000476970 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-205ENST00000476970 SRGNP10124 158 aa10.12□□□□□ -0.79
PRPF3-205ENST00000476970 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-205ENST00000476970 SAMD1Q6SPF0 538 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-205ENST00000476970 SLC52A2Q9HAB3 445 aa10.12□□□□□ -0.79
PRPF3-205ENST00000476970 TLL2Q9Y6L7 1015 aa10.12□□□□□ -0.79
PRPF3-205ENST00000476970 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
PRPF3-205ENST00000476970 TBC1D9BQ66K14 1250 aa10.11□□□□□ -0.79
PRPF3-205ENST00000476970 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
PRPF3-205ENST00000476970 RTKN2Q8IZC4 609 aa10.11□□□□□ -0.79
PRPF3-205ENST00000476970 FZD9O00144 591 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 STARD3NLO95772 234 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
PRPF3-205ENST00000476970 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 JDP2Q8WYK2 163 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 GCC1Q96CN9 775 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 CARD14Q9BXL6 1004 aa10.1□□□□□ -0.79
PRPF3-205ENST00000476970 ZNF277Q9NRM2 450 aaPredicted RBP10.1□□□□□ -0.79
PRPF3-205ENST00000476970 AOC2O75106 756 aa10.09□□□□□ -0.79
PRPF3-205ENST00000476970 IARSP41252 1262 aaKnown RBP10.09□□□□□ -0.79
PRPF3-205ENST00000476970 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
PRPF3-205ENST00000476970 HHIPL1Q96JK4 782 aa10.09□□□□□ -0.79
PRPF3-205ENST00000476970 AKAP11Q9UKA4 1901 aa10.09□□□□□ -0.79
PRPF3-205ENST00000476970 NPR1P16066 1061 aa10.08□□□□□ -0.8
PRPF3-205ENST00000476970 SOX10P56693 466 aa10.08□□□□□ -0.8
PRPF3-205ENST00000476970 USP50Q70EL3 339 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-205ENST00000476970 TTC5Q8N0Z6 440 aa10.08□□□□□ -0.8
PRPF3-205ENST00000476970 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
PRPF3-205ENST00000476970 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
PRPF3-205ENST00000476970 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
PRPF3-205ENST00000476970 TNNT2P45379 298 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-205ENST00000476970 SLC39A6Q13433 755 aa10.07□□□□□ -0.8
PRPF3-205ENST00000476970 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
PRPF3-205ENST00000476970 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
PRPF3-205ENST00000476970 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
PRPF3-205ENST00000476970 NOGQ13253 232 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 CST9Q5W186 159 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 SULT6B1Q6IMI4 303 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
PRPF3-205ENST00000476970 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 PSMD1Q99460 953 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
PRPF3-205ENST00000476970 GJA3Q9Y6H8 435 aa10.06□□□□□ -0.8
PRPF3-205ENST00000476970 TRAF5O00463 557 aa10.05□□□□□ -0.8
PRPF3-205ENST00000476970 RNMTO43148 476 aaKnown RBP10.05□□□□□ -0.8
PRPF3-205ENST00000476970 CELF2O95319 508 aaKnown RBP10.05□□□□□ -0.8
PRPF3-205ENST00000476970 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
PRPF3-205ENST00000476970 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
PRPF3-205ENST00000476970 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
PRPF3-205ENST00000476970 ALDH1B1P30837 517 aa10.04□□□□□ -0.8
PRPF3-205ENST00000476970 SCNN1DP51172 638 aa10.04□□□□□ -0.8
PRPF3-205ENST00000476970 FMR1Q06787 632 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRPF3-205ENST00000476970 CC2D2BQ6DHV5 1058 aa10.04□□□□□ -0.8
PRPF3-205ENST00000476970 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
PRPF3-205ENST00000476970 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
PRPF3-205ENST00000476970 HEG1Q9ULI3 1381 aa10.03□□□□□ -0.8
PRPF3-205ENST00000476970 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
PRPF3-205ENST00000476970 EPS15P42566 896 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms