RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ERBB3P21860 1342 aa25.49■■□□□ 1.67
LIMS2-214ENST00000476932 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
LIMS2-214ENST00000476932 KAZALD1Q96I82 304 aa25.48■■□□□ 1.67
LIMS2-214ENST00000476932 HYPKQ9NX55 129 aa25.48■■□□□ 1.67
LIMS2-214ENST00000476932 UTYO14607 1347 aa25.48■■□□□ 1.67
LIMS2-214ENST00000476932 CWC27Q6UX04 472 aaKnown RBP25.48■■□□□ 1.67
LIMS2-214ENST00000476932 RBSNQ9H1K0 784 aa25.48■■□□□ 1.67
LIMS2-214ENST00000476932 PDIA6Q15084 440 aa25.47■■□□□ 1.67
LIMS2-214ENST00000476932 KRT28Q7Z3Y7 464 aa25.47■■□□□ 1.67
LIMS2-214ENST00000476932 TRIM44Q96DX7 344 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-214ENST00000476932 RPAP1Q9BWH6 1393 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-214ENST00000476932 KDM6AO15550 1401 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-214ENST00000476932 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
LIMS2-214ENST00000476932 CLASRPQ8N2M8 674 aaKnown RBP25.47■■□□□ 1.67
LIMS2-214ENST00000476932 LINS1Q8NG48 757 aa25.46■■□□□ 1.67
LIMS2-214ENST00000476932 SUCLG2Q96I99 432 aa25.46■■□□□ 1.67
LIMS2-214ENST00000476932 DDX21Q9NR30 783 aaKnown RBP eCLIP25.46■■□□□ 1.67
LIMS2-214ENST00000476932 ECHDC1Q9NTX5 307 aa25.46■■□□□ 1.67
LIMS2-214ENST00000476932 SPG7Q9UQ90 795 aa25.46■■□□□ 1.67
LIMS2-214ENST00000476932 COL18A1P39060 1754 aa25.45■■□□□ 1.67
LIMS2-214ENST00000476932 GRM8O00222 908 aa25.45■■□□□ 1.66
LIMS2-214ENST00000476932 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.44■■□□□ 1.66
LIMS2-214ENST00000476932 ERC1Q8IUD2 1116 aa25.44■■□□□ 1.66
LIMS2-214ENST00000476932 MBD3O95983 291 aa25.43■■□□□ 1.66
LIMS2-214ENST00000476932 AK2P54819 239 aa25.43■■□□□ 1.66
LIMS2-214ENST00000476932 RUFY3Q7L099 469 aa25.43■■□□□ 1.66
LIMS2-214ENST00000476932 BICC1Q9H694 974 aaKnown RBP25.42■■□□□ 1.66
LIMS2-214ENST00000476932 SASH1O94885 1247 aa25.42■■□□□ 1.66
LIMS2-214ENST00000476932 LRSAM1Q6UWE0 723 aa25.42■■□□□ 1.66
LIMS2-214ENST00000476932 KIAA1211Q6ZU35 1233 aa25.42■■□□□ 1.66
LIMS2-214ENST00000476932 DIAPH3Q9NSV4 1193 aa25.42■■□□□ 1.66
LIMS2-214ENST00000476932 IGKV5-2P06315 115 aa25.41■■□□□ 1.66
LIMS2-214ENST00000476932 PTH1RQ03431 593 aa25.41■■□□□ 1.66
LIMS2-214ENST00000476932 HDAC5Q9UQL6 1122 aa25.41■■□□□ 1.66
LIMS2-214ENST00000476932 MEGF6O75095 1541 aa25.41■■□□□ 1.66
LIMS2-214ENST00000476932 MRC1P22897 1456 aa25.41■■□□□ 1.66
LIMS2-214ENST00000476932 WDR33Q9C0J8 1336 aaKnown RBP25.41■■□□□ 1.66
LIMS2-214ENST00000476932 SYCE3A1L190 88 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 ABCC6O95255 1503 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 IFIT2P09913 472 aaKnown RBP25.4■■□□□ 1.66
LIMS2-214ENST00000476932 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 AACSQ86V21 672 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 NPHP3Q7Z494 1330 aa25.4■■□□□ 1.66
LIMS2-214ENST00000476932 DDX58O95786 925 aaKnown RBP25.39■■□□□ 1.66
LIMS2-214ENST00000476932 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
LIMS2-214ENST00000476932 AIMP1Q12904 312 aaKnown RBP25.39■■□□□ 1.66
LIMS2-214ENST00000476932 KCNB2Q92953 911 aa25.39■■□□□ 1.66
LIMS2-214ENST00000476932 GPATCH3Q96I76 525 aa25.39■■□□□ 1.66
LIMS2-214ENST00000476932 SLC52A2Q9HAB3 445 aa25.39■■□□□ 1.65
LIMS2-214ENST00000476932 PROSER2Q86WR7 435 aaPredicted RBP25.38■■□□□ 1.65
LIMS2-214ENST00000476932 RUFY2Q8WXA3 655 aa25.38■■□□□ 1.65
LIMS2-214ENST00000476932 ANP32BQ92688 251 aaKnown RBP25.38■■□□□ 1.65
LIMS2-214ENST00000476932 EAF2Q96CJ1 260 aaPredicted RBP25.38■■□□□ 1.65
LIMS2-214ENST00000476932 PDLIM2Q96JY6 352 aa25.38■■□□□ 1.65
LIMS2-214ENST00000476932 CPA1P15085 419 aa25.38■■□□□ 1.65
LIMS2-214ENST00000476932 LIMCH1Q9UPQ0 1083 aa25.38■■□□□ 1.65
LIMS2-214ENST00000476932 AFDNP55196 1824 aaKnown RBP25.38■■□□□ 1.65
LIMS2-214ENST00000476932 EVI5LQ96CN4 794 aa25.37■■□□□ 1.65
LIMS2-214ENST00000476932 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
LIMS2-214ENST00000476932 CASTP20810 708 aaKnown RBP25.37■■□□□ 1.65
LIMS2-214ENST00000476932 LARP6Q9BRS8 491 aaKnown RBP25.37■■□□□ 1.65
LIMS2-214ENST00000476932 LARGE1O95461 756 aa25.36■■□□□ 1.65
LIMS2-214ENST00000476932 ADCK5Q3MIX3 580 aa25.36■■□□□ 1.65
LIMS2-214ENST00000476932 GLI3P10071 1580 aa25.36■■□□□ 1.65
LIMS2-214ENST00000476932 PHKG2P15735 406 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 GDPD2Q9HCC8 539 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 TLR7Q9NYK1 1049 aaKnown RBP25.35■■□□□ 1.65
LIMS2-214ENST00000476932 ARFGEF2Q9Y6D5 1785 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 GADD45BO75293 160 aaPredicted RBP25.35■■□□□ 1.65
LIMS2-214ENST00000476932 FOXD4L6Q3SYB3 417 aaPredicted RBP25.35■■□□□ 1.65
LIMS2-214ENST00000476932 FOXD4L3Q6VB84 417 aaPredicted RBP25.35■■□□□ 1.65
LIMS2-214ENST00000476932 RAPGEF4Q8WZA2 1011 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 C19orf44Q9H6X5 657 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 CCDC171Q6TFL3 1326 aa25.35■■□□□ 1.65
LIMS2-214ENST00000476932 NEURL1BA8MQ27 555 aa25.34■■□□□ 1.65
LIMS2-214ENST00000476932 TMEM87AQ8NBN3 555 aa25.34■■□□□ 1.65
LIMS2-214ENST00000476932 STRCP1A6NGW2 1772 aa25.34■■□□□ 1.65
LIMS2-214ENST00000476932 NECTIN1Q15223 517 aa25.34■■□□□ 1.65
LIMS2-214ENST00000476932 PRPF40BQ6NWY9 871 aaKnown RBP25.34■■□□□ 1.65
LIMS2-214ENST00000476932 LRP10Q7Z4F1 713 aa25.34■■□□□ 1.65
LIMS2-214ENST00000476932 LARP1Q6PKG0 1096 aaKnown RBP25.33■■□□□ 1.65
LIMS2-214ENST00000476932 RIC3Q7Z5B4 369 aa25.33■■□□□ 1.65
LIMS2-214ENST00000476932 USP48Q86UV5 1035 aa25.33■■□□□ 1.65
LIMS2-214ENST00000476932 TM6SF1Q9BZW5 370 aa25.33■■□□□ 1.65
LIMS2-214ENST00000476932 G3BP1Q13283 466 aaKnown RBP eCLIP25.33■■□□□ 1.64
LIMS2-214ENST00000476932 ZSCAN30Q86W11 494 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 NFATC2IPQ8NCF5 419 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 XAGE3Q8WTP9 111 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 CCDC8Q9H0W5 538 aaPredicted RBP25.33■■□□□ 1.64
LIMS2-214ENST00000476932 ZSWIM6Q9HCJ5 1215 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 SNRKQ9NRH2 765 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 NLRP2Q9NX02 1062 aa25.33■■□□□ 1.64
LIMS2-214ENST00000476932 ZSCAN22P10073 491 aaPredicted RBP25.32■■□□□ 1.64
LIMS2-214ENST00000476932 MYL6BP14649 208 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 EPHA10Q5JZY3 1008 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 VPS53Q5VIR6 699 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 ZNF496Q96IT1 587 aaPredicted RBP25.32■■□□□ 1.64
LIMS2-214ENST00000476932 FAM227BQ96M60 508 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 JAKMIP1Q96N16 626 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms