RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 HEG1Q9ULI3 1381 aa15.43■□□□□ 0.06
BRCA1-213ENST00000476777 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
BRCA1-213ENST00000476777 ITGBL1O95965 494 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-213ENST00000476777 CTCFP49711 727 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-213ENST00000476777 VEGFBP49765 207 aa15.42■□□□□ 0.06
BRCA1-213ENST00000476777 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
BRCA1-213ENST00000476777 C7orf43Q8WVR3 580 aa15.42■□□□□ 0.06
BRCA1-213ENST00000476777 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
BRCA1-213ENST00000476777 SCN4AP35499 1836 aa15.41■□□□□ 0.06
BRCA1-213ENST00000476777 TMEM88BA6NKF7 163 aa15.41■□□□□ 0.06
BRCA1-213ENST00000476777 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
BRCA1-213ENST00000476777 NPHP1O15259 732 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
BRCA1-213ENST00000476777 A1BGP04217 495 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 ST5P78524 1137 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 AIDAQ96BJ3 306 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 WBP1LQ9NX94 342 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 CACNA1SQ13698 1873 aa15.4■□□□□ 0.06
BRCA1-213ENST00000476777 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
BRCA1-213ENST00000476777 TEFQ10587 303 aa15.39■□□□□ 0.05
BRCA1-213ENST00000476777 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
BRCA1-213ENST00000476777 GNAT3A8MTJ3 354 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 LBX1P52954 281 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-213ENST00000476777 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
BRCA1-213ENST00000476777 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
BRCA1-213ENST00000476777 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-213ENST00000476777 DZIP3Q86Y13 1208 aaKnown RBP15.37■□□□□ 0.05
BRCA1-213ENST00000476777 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-213ENST00000476777 HACL1Q9UJ83 578 aa15.37■□□□□ 0.05
BRCA1-213ENST00000476777 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-213ENST00000476777 KLRG2A4D1S0 409 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-213ENST00000476777 KCNQ3O43525 872 aa15.36■□□□□ 0.05
BRCA1-213ENST00000476777 FKBP4Q02790 459 aaKnown RBP eCLIP15.36■□□□□ 0.05
BRCA1-213ENST00000476777 NBPF5PQ86XG9 351 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-213ENST00000476777 GAS2L2Q8NHY3 880 aa15.36■□□□□ 0.05
BRCA1-213ENST00000476777 BCORQ6W2J9 1755 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 NPR1P16066 1061 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 EPHX2P34913 555 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
BRCA1-213ENST00000476777 SLC34A2O95436 690 aa15.34■□□□□ 0.05
BRCA1-213ENST00000476777 HSPA8P11142 646 aaKnown RBP15.34■□□□□ 0.05
BRCA1-213ENST00000476777 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-213ENST00000476777 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
BRCA1-213ENST00000476777 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
BRCA1-213ENST00000476777 USP16Q9Y5T5 823 aa15.34■□□□□ 0.05
BRCA1-213ENST00000476777 FZD9O00144 591 aa15.33■□□□□ 0.04
BRCA1-213ENST00000476777 PER1O15534 1290 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-213ENST00000476777 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-213ENST00000476777 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-213ENST00000476777 RTKN2Q8IZC4 609 aa15.33■□□□□ 0.04
BRCA1-213ENST00000476777 ABHD8Q96I13 439 aa15.33■□□□□ 0.04
BRCA1-213ENST00000476777 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
BRCA1-213ENST00000476777 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-213ENST00000476777 PRAMEF22A3QJZ6 481 aa15.32■□□□□ 0.04
BRCA1-213ENST00000476777 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
BRCA1-213ENST00000476777 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
BRCA1-213ENST00000476777 WDR33Q9C0J8 1336 aaKnown RBP15.32■□□□□ 0.04
BRCA1-213ENST00000476777 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
BRCA1-213ENST00000476777 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
BRCA1-213ENST00000476777 MAP2K1Q02750 393 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-213ENST00000476777 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
BRCA1-213ENST00000476777 GPC2Q8N158 579 aa15.31■□□□□ 0.04
BRCA1-213ENST00000476777 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
BRCA1-213ENST00000476777 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
BRCA1-213ENST00000476777 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
BRCA1-213ENST00000476777 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
BRCA1-213ENST00000476777 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
BRCA1-213ENST00000476777 ABT1Q9ULW3 272 aaKnown RBP15.3■□□□□ 0.04
BRCA1-213ENST00000476777 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
BRCA1-213ENST00000476777 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 NBPF26B4DH59 902 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 RGL2O15211 777 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
BRCA1-213ENST00000476777 NBPF15Q8N660 670 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
BRCA1-213ENST00000476777 PDE4DIPQ5VU43 2346 aa15.29■□□□□ 0.04
BRCA1-213ENST00000476777 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
BRCA1-213ENST00000476777 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
BRCA1-213ENST00000476777 PSMD1Q99460 953 aa15.28■□□□□ 0.04
BRCA1-213ENST00000476777 FAM177BA6PVY3 158 aa15.27■□□□□ 0.04
BRCA1-213ENST00000476777 JDP2Q8WYK2 163 aa15.27■□□□□ 0.04
BRCA1-213ENST00000476777 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
BRCA1-213ENST00000476777 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
BRCA1-213ENST00000476777 CRY2Q49AN0 593 aa15.26■□□□□ 0.03
BRCA1-213ENST00000476777 COL4A5P29400 1685 aa15.25■□□□□ 0.03
BRCA1-213ENST00000476777 HLFQ16534 295 aa15.25■□□□□ 0.03
BRCA1-213ENST00000476777 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
BRCA1-213ENST00000476777 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
BRCA1-213ENST00000476777 GJA3Q9Y6H8 435 aa15.25■□□□□ 0.03
BRCA1-213ENST00000476777 LTBP1Q14766 1721 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms