RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 CFAP99D6REC4 459 aa11.49□□□□□ -0.57
CHD6-207ENST00000476641 ZIC2O95409 532 aaPredicted RBP11.49□□□□□ -0.57
CHD6-207ENST00000476641 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
CHD6-207ENST00000476641 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
CHD6-207ENST00000476641 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
CHD6-207ENST00000476641 SOS2Q07890 1332 aaPredicted RBP11.49□□□□□ -0.57
CHD6-207ENST00000476641 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
CHD6-207ENST00000476641 MAN1A2O60476 641 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 ADAMTS2O95450 1211 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 GJA5P36382 358 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 POGKQ9P215 609 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 SHPRHQ149N8 1683 aa11.48□□□□□ -0.57
CHD6-207ENST00000476641 NBPF1Q3BBV0 1214 aa11.47□□□□□ -0.57
CHD6-207ENST00000476641 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
CHD6-207ENST00000476641 PXDNQ92626 1479 aa11.46□□□□□ -0.57
CHD6-207ENST00000476641 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
CHD6-207ENST00000476641 NR3C2P08235 984 aa11.46□□□□□ -0.57
CHD6-207ENST00000476641 AGERQ15109 404 aa11.46□□□□□ -0.57
CHD6-207ENST00000476641 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
CHD6-207ENST00000476641 C8orf37Q96NL8 207 aa11.46□□□□□ -0.57
CHD6-207ENST00000476641 LAMC1P11047 1609 aa11.46□□□□□ -0.58
CHD6-207ENST00000476641 AFF2P51816 1311 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 NR5A1Q13285 461 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
CHD6-207ENST00000476641 FMN2Q9NZ56 1722 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 SPTLC1O15269 473 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 ZMYND10O75800 440 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 PMFBP1Q8TBY8 1022 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
CHD6-207ENST00000476641 C4orf48Q5BLP8 95 aa11.43□□□□□ -0.58
CHD6-207ENST00000476641 BMP2P12643 396 aa11.42□□□□□ -0.58
CHD6-207ENST00000476641 GRM5P41594 1212 aa11.42□□□□□ -0.58
CHD6-207ENST00000476641 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
CHD6-207ENST00000476641 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
CHD6-207ENST00000476641 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
CHD6-207ENST00000476641 UPP2O95045 317 aa11.41□□□□□ -0.58
CHD6-207ENST00000476641 ZNF772Q68DY9 489 aaPredicted RBP11.41□□□□□ -0.58
CHD6-207ENST00000476641 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
CHD6-207ENST00000476641 SPATA31A3Q5VYP0 1347 aa11.4□□□□□ -0.58
CHD6-207ENST00000476641 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
CHD6-207ENST00000476641 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
CHD6-207ENST00000476641 PARP9Q8IXQ6 854 aa11.4□□□□□ -0.58
CHD6-207ENST00000476641 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
CHD6-207ENST00000476641 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
CHD6-207ENST00000476641 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
CHD6-207ENST00000476641 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
CHD6-207ENST00000476641 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
CHD6-207ENST00000476641 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
CHD6-207ENST00000476641 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
CHD6-207ENST00000476641 MEIOBQ8N635 442 aa11.39□□□□□ -0.59
CHD6-207ENST00000476641 RGPD8O14715 1765 aaPredicted RBP11.39□□□□□ -0.59
CHD6-207ENST00000476641 ANKARQ7Z5J8 1434 aa11.38□□□□□ -0.59
CHD6-207ENST00000476641 ZC3H15Q8WU90 426 aaKnown RBP11.38□□□□□ -0.59
CHD6-207ENST00000476641 TSC1Q92574 1164 aa11.38□□□□□ -0.59
CHD6-207ENST00000476641 RXRBP28702 533 aa11.37□□□□□ -0.59
CHD6-207ENST00000476641 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
CHD6-207ENST00000476641 CDK19Q9BWU1 502 aa11.37□□□□□ -0.59
CHD6-207ENST00000476641 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
CHD6-207ENST00000476641 ARHGEF28Q8N1W1 1705 aaKnown RBP11.37□□□□□ -0.59
CHD6-207ENST00000476641 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 COL22A1Q8NFW1 1626 aaPredicted RBP11.36□□□□□ -0.59
CHD6-207ENST00000476641 FSHRP23945 695 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 PSME1Q06323 249 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
CHD6-207ENST00000476641 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
CHD6-207ENST00000476641 DNMT3LQ9UJW3 386 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 USP21Q9UK80 565 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 ATP7BP35670 1465 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
CHD6-207ENST00000476641 RGS12O14924 1447 aa11.35□□□□□ -0.59
CHD6-207ENST00000476641 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
CHD6-207ENST00000476641 FNBP4Q8N3X1 1017 aaPredicted RBP11.35□□□□□ -0.59
CHD6-207ENST00000476641 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
CHD6-207ENST00000476641 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
CHD6-207ENST00000476641 SBNO1A3KN83 1393 aa11.34□□□□□ -0.59
CHD6-207ENST00000476641 ARMC2Q8NEN0 867 aa11.34□□□□□ -0.59
CHD6-207ENST00000476641 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
CHD6-207ENST00000476641 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
CHD6-207ENST00000476641 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
CHD6-207ENST00000476641 ATRNO75882 1429 aa11.33□□□□□ -0.6
CHD6-207ENST00000476641 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
CHD6-207ENST00000476641 EIF3AQ14152 1382 aaKnown RBP11.32□□□□□ -0.6
CHD6-207ENST00000476641 TRIM66O15016 1216 aa11.32□□□□□ -0.6
CHD6-207ENST00000476641 KCNMA1Q12791 1236 aa11.32□□□□□ -0.6
CHD6-207ENST00000476641 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
CHD6-207ENST00000476641 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
CHD6-207ENST00000476641 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
CHD6-207ENST00000476641 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
CHD6-207ENST00000476641 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
CHD6-207ENST00000476641 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms