RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 C7orf43Q8WVR3 580 aa11.69□□□□□ -0.54
RPGR-207ENST00000476559 PHACTR1Q9C0D0 580 aa11.69□□□□□ -0.54
RPGR-207ENST00000476559 OIP5O43482 229 aa11.67□□□□□ -0.54
RPGR-207ENST00000476559 FAM157BP0CG42 384 aa11.67□□□□□ -0.54
RPGR-207ENST00000476559 ARXQ96QS3 562 aa11.67□□□□□ -0.54
RPGR-207ENST00000476559 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
RPGR-207ENST00000476559 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
RPGR-207ENST00000476559 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
RPGR-207ENST00000476559 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
RPGR-207ENST00000476559 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
RPGR-207ENST00000476559 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
RPGR-207ENST00000476559 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
RPGR-207ENST00000476559 POTEAQ6S8J7 498 aa11.65□□□□□ -0.54
RPGR-207ENST00000476559 HSH2DQ96JZ2 352 aa11.65□□□□□ -0.54
RPGR-207ENST00000476559 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
RPGR-207ENST00000476559 GGA1Q9UJY5 639 aa11.65□□□□□ -0.54
RPGR-207ENST00000476559 GDF2Q9UK05 429 aaPredicted RBP11.65□□□□□ -0.54
RPGR-207ENST00000476559 DNMT3AQ9Y6K1 912 aaPredicted RBP11.65□□□□□ -0.54
RPGR-207ENST00000476559 KCNMA1Q12791 1236 aa11.64□□□□□ -0.55
RPGR-207ENST00000476559 ALDH16A1Q8IZ83 802 aa11.64□□□□□ -0.55
RPGR-207ENST00000476559 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
RPGR-207ENST00000476559 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
RPGR-207ENST00000476559 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 IRS1P35568 1242 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 GSK3AP49840 483 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 MARK1Q9P0L2 795 aa11.63□□□□□ -0.55
RPGR-207ENST00000476559 GPC6Q9Y625 555 aaPredicted RBP11.63□□□□□ -0.55
RPGR-207ENST00000476559 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 NEURL1BA8MQ27 555 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 RNF225M0QZC1 329 aaPredicted RBP11.62□□□□□ -0.55
RPGR-207ENST00000476559 EFSO43281 561 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 EDARADDQ8WWZ3 215 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 SCARF2Q96GP6 870 aaPredicted RBP11.62□□□□□ -0.55
RPGR-207ENST00000476559 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
RPGR-207ENST00000476559 NOVA2Q9UNW9 492 aaKnown RBP11.62□□□□□ -0.55
RPGR-207ENST00000476559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.61□□□□□ -0.55
RPGR-207ENST00000476559 RASSF7Q02833 373 aa11.61□□□□□ -0.55
RPGR-207ENST00000476559 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
RPGR-207ENST00000476559 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
RPGR-207ENST00000476559 PRR12Q9ULL5 1215 aa11.61□□□□□ -0.55
RPGR-207ENST00000476559 ARAFP10398 606 aa11.6□□□□□ -0.55
RPGR-207ENST00000476559 IGFBP4P22692 258 aa11.6□□□□□ -0.55
RPGR-207ENST00000476559 SUSD3Q96L08 255 aa11.6□□□□□ -0.55
RPGR-207ENST00000476559 CEP63Q96MT8 703 aa11.6□□□□□ -0.55
RPGR-207ENST00000476559 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
RPGR-207ENST00000476559 SFSWAPQ12872 951 aaKnown RBP11.59□□□□□ -0.55
RPGR-207ENST00000476559 SLCO4C1Q6ZQN7 724 aa11.59□□□□□ -0.55
RPGR-207ENST00000476559 ANKIB1Q9P2G1 1089 aa11.59□□□□□ -0.55
RPGR-207ENST00000476559 KLF15Q9UIH9 416 aa11.59□□□□□ -0.55
RPGR-207ENST00000476559 GDF11O95390 407 aa11.58□□□□□ -0.56
RPGR-207ENST00000476559 LAMC2Q13753 1193 aa11.58□□□□□ -0.56
RPGR-207ENST00000476559 CCDC97Q96F63 343 aaPredicted RBP11.58□□□□□ -0.56
RPGR-207ENST00000476559 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
RPGR-207ENST00000476559 AMPD1P23109 780 aa11.57□□□□□ -0.56
RPGR-207ENST00000476559 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
RPGR-207ENST00000476559 TMEM151AQ8N4L1 468 aa11.57□□□□□ -0.56
RPGR-207ENST00000476559 BRD7Q9NPI1 651 aa11.57□□□□□ -0.56
RPGR-207ENST00000476559 ZMIZ1Q9ULJ6 1067 aa11.57□□□□□ -0.56
RPGR-207ENST00000476559 EPXP11678 715 aa11.56□□□□□ -0.56
RPGR-207ENST00000476559 ADH6P28332 368 aa11.56□□□□□ -0.56
RPGR-207ENST00000476559 WEE1P30291 646 aa11.56□□□□□ -0.56
RPGR-207ENST00000476559 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
RPGR-207ENST00000476559 BEND7Q8N7W2 519 aaPredicted RBP11.56□□□□□ -0.56
RPGR-207ENST00000476559 SRPK2P78362 688 aaKnown RBP11.55□□□□□ -0.56
RPGR-207ENST00000476559 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
RPGR-207ENST00000476559 STK32AQ8WU08 396 aa11.55□□□□□ -0.56
RPGR-207ENST00000476559 TYRO3Q06418 890 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 RTN1Q16799 776 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 FCHSD1Q86WN1 690 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 SLC30A3Q99726 388 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 SERPINA10Q9UK55 444 aa11.54□□□□□ -0.56
RPGR-207ENST00000476559 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
RPGR-207ENST00000476559 SYT9Q86SS6 491 aa11.53□□□□□ -0.56
RPGR-207ENST00000476559 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
RPGR-207ENST00000476559 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
RPGR-207ENST00000476559 BTBD6Q96KE9 485 aa11.53□□□□□ -0.56
RPGR-207ENST00000476559 PRMT3O60678 531 aa11.52□□□□□ -0.57
RPGR-207ENST00000476559 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
RPGR-207ENST00000476559 BTLAQ7Z6A9 289 aa11.52□□□□□ -0.57
RPGR-207ENST00000476559 RAB44Q7Z6P3 723 aaPredicted RBP11.52□□□□□ -0.57
RPGR-207ENST00000476559 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
RPGR-207ENST00000476559 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.57
RPGR-207ENST00000476559 KLK14Q9P0G3 267 aa11.52□□□□□ -0.57
RPGR-207ENST00000476559 FOXO3O43524 673 aa11.51□□□□□ -0.57
RPGR-207ENST00000476559 SPEM2Q0P670 501 aa11.51□□□□□ -0.57
RPGR-207ENST00000476559 ELOAQ14241 798 aaKnown RBP11.51□□□□□ -0.57
RPGR-207ENST00000476559 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
RPGR-207ENST00000476559 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
RPGR-207ENST00000476559 HIF1AQ16665 826 aa11.5□□□□□ -0.57
RPGR-207ENST00000476559 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
RPGR-207ENST00000476559 BCS1LQ9Y276 419 aa11.5□□□□□ -0.57
RPGR-207ENST00000476559 ATG7O95352 703 aa11.49□□□□□ -0.57
RPGR-207ENST00000476559 DGKZQ13574 1117 aa11.49□□□□□ -0.57
RPGR-207ENST00000476559 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
RPGR-207ENST00000476559 HOXB4P17483 251 aaPredicted RBP11.48□□□□□ -0.57
RPGR-207ENST00000476559 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms