RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
RAB5A-208ENST00000476544 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
RAB5A-208ENST00000476544 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
RAB5A-208ENST00000476544 COPS6Q7L5N1 327 aa17.8■□□□□ 0.44
RAB5A-208ENST00000476544 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
RAB5A-208ENST00000476544 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
RAB5A-208ENST00000476544 MAP3K15Q6ZN16 1313 aa17.79■□□□□ 0.44
RAB5A-208ENST00000476544 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
RAB5A-208ENST00000476544 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
RAB5A-208ENST00000476544 HOXB7P09629 217 aa17.78■□□□□ 0.44
RAB5A-208ENST00000476544 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
RAB5A-208ENST00000476544 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
RAB5A-208ENST00000476544 XAGE3Q8WTP9 111 aa17.78■□□□□ 0.44
RAB5A-208ENST00000476544 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
RAB5A-208ENST00000476544 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
RAB5A-208ENST00000476544 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
RAB5A-208ENST00000476544 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
RAB5A-208ENST00000476544 NIP7Q9Y221 180 aaKnown RBP eCLIP17.77■□□□□ 0.44
RAB5A-208ENST00000476544 IL16Q14005 1332 aa17.76■□□□□ 0.43
RAB5A-208ENST00000476544 YY1P25490 414 aa17.76■□□□□ 0.43
RAB5A-208ENST00000476544 HDGFL1Q5TGJ6 251 aa17.76■□□□□ 0.43
RAB5A-208ENST00000476544 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
RAB5A-208ENST00000476544 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
RAB5A-208ENST00000476544 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
RAB5A-208ENST00000476544 SUSD4Q5VX71 490 aa17.75■□□□□ 0.43
RAB5A-208ENST00000476544 MIER1Q8N108 512 aa17.75■□□□□ 0.43
RAB5A-208ENST00000476544 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
RAB5A-208ENST00000476544 BCS1LQ9Y276 419 aa17.75■□□□□ 0.43
RAB5A-208ENST00000476544 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 KLRG2A4D1S0 409 aaPredicted RBP17.74■□□□□ 0.43
RAB5A-208ENST00000476544 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 GPTP24298 496 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 C2CD5Q86YS7 1000 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
RAB5A-208ENST00000476544 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
RAB5A-208ENST00000476544 PHAXQ9H814 394 aaKnown RBP17.73■□□□□ 0.43
RAB5A-208ENST00000476544 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
RAB5A-208ENST00000476544 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
RAB5A-208ENST00000476544 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
RAB5A-208ENST00000476544 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
RAB5A-208ENST00000476544 SRGNP10124 158 aa17.71■□□□□ 0.43
RAB5A-208ENST00000476544 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
RAB5A-208ENST00000476544 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
RAB5A-208ENST00000476544 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
RAB5A-208ENST00000476544 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
RAB5A-208ENST00000476544 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
RAB5A-208ENST00000476544 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
RAB5A-208ENST00000476544 H0YIN7 160 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
RAB5A-208ENST00000476544 VAMP4O75379 141 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
RAB5A-208ENST00000476544 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 NTSR2O95665 410 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 PDE6BP35913 854 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 PRELPP51888 382 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 ARHGAP27Q6ZUM4 889 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 KIF13BQ9NQT8 1826 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
RAB5A-208ENST00000476544 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
RAB5A-208ENST00000476544 G2E3Q7L622 706 aa17.68■□□□□ 0.42
RAB5A-208ENST00000476544 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
RAB5A-208ENST00000476544 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
RAB5A-208ENST00000476544 ISCA1Q9BUE6 129 aa17.68■□□□□ 0.42
RAB5A-208ENST00000476544 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
RAB5A-208ENST00000476544 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
RAB5A-208ENST00000476544 ZNF784Q8NCA9 323 aaPredicted RBP17.67■□□□□ 0.42
RAB5A-208ENST00000476544 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
RAB5A-208ENST00000476544 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
RAB5A-208ENST00000476544 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
RAB5A-208ENST00000476544 ST5P78524 1137 aa17.66■□□□□ 0.42
RAB5A-208ENST00000476544 CCDC30Q5VVM6 783 aa17.66■□□□□ 0.42
RAB5A-208ENST00000476544 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
RAB5A-208ENST00000476544 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
RAB5A-208ENST00000476544 TRIM28Q13263 835 aaKnown RBP17.65■□□□□ 0.42
RAB5A-208ENST00000476544 STYK1Q6J9G0 422 aa17.65■□□□□ 0.42
RAB5A-208ENST00000476544 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
RAB5A-208ENST00000476544 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.41
RAB5A-208ENST00000476544 AFDNP55196 1824 aaKnown RBP17.64■□□□□ 0.41
RAB5A-208ENST00000476544 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
RAB5A-208ENST00000476544 CRY2Q49AN0 593 aa17.64■□□□□ 0.41
RAB5A-208ENST00000476544 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
RAB5A-208ENST00000476544 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
RAB5A-208ENST00000476544 MASTLQ96GX5 879 aa17.64■□□□□ 0.41
RAB5A-208ENST00000476544 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
RAB5A-208ENST00000476544 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
RAB5A-208ENST00000476544 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
RAB5A-208ENST00000476544 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
RAB5A-208ENST00000476544 NPHP1O15259 732 aa17.62■□□□□ 0.41
RAB5A-208ENST00000476544 C21orf2O43822 256 aa17.62■□□□□ 0.41
RAB5A-208ENST00000476544 NPR1P16066 1061 aa17.62■□□□□ 0.41
RAB5A-208ENST00000476544 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
RAB5A-208ENST00000476544 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms