RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
PGK1-203ENST00000476531 KCNQ3O43525 872 aa13.99□□□□□ -0.17
PGK1-203ENST00000476531 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
PGK1-203ENST00000476531 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
PGK1-203ENST00000476531 FMNL2Q96PY5 1086 aa13.99□□□□□ -0.17
PGK1-203ENST00000476531 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
PGK1-203ENST00000476531 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
PGK1-203ENST00000476531 SRGNP10124 158 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 PHACTR3Q96KR7 559 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 TAOK3Q9H2K8 898 aa13.97□□□□□ -0.17
PGK1-203ENST00000476531 DICER1Q9UPY3 1922 aaKnown RBP13.97□□□□□ -0.17
PGK1-203ENST00000476531 BCORQ6W2J9 1755 aa13.96□□□□□ -0.17
PGK1-203ENST00000476531 DDNO94850 711 aaPredicted RBP13.96□□□□□ -0.17
PGK1-203ENST00000476531 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
PGK1-203ENST00000476531 POTEJP0CG39 1038 aa13.96□□□□□ -0.17
PGK1-203ENST00000476531 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
PGK1-203ENST00000476531 DZIP3Q86Y13 1208 aaKnown RBP13.96□□□□□ -0.17
PGK1-203ENST00000476531 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
PGK1-203ENST00000476531 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
PGK1-203ENST00000476531 SLX4Q8IY92 1834 aa13.96□□□□□ -0.17
PGK1-203ENST00000476531 PRAMEF22A3QJZ6 481 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 BTBD11A6QL63 1104 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 PIP4K2AP48426 406 aaPredicted RBP13.95□□□□□ -0.18
PGK1-203ENST00000476531 ST5P78524 1137 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 MASTLQ96GX5 879 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
PGK1-203ENST00000476531 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
PGK1-203ENST00000476531 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
PGK1-203ENST00000476531 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
PGK1-203ENST00000476531 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
PGK1-203ENST00000476531 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
PGK1-203ENST00000476531 SOGA3Q5TF21 947 aa13.93□□□□□ -0.18
PGK1-203ENST00000476531 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
PGK1-203ENST00000476531 NPHP1O15259 732 aa13.92□□□□□ -0.18
PGK1-203ENST00000476531 CLEC4GQ6UXB4 293 aa13.92□□□□□ -0.18
PGK1-203ENST00000476531 NBPF5PQ86XG9 351 aaPredicted RBP13.92□□□□□ -0.18
PGK1-203ENST00000476531 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
PGK1-203ENST00000476531 MKRN1Q9UHC7 482 aaKnown RBP13.92□□□□□ -0.18
PGK1-203ENST00000476531 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
PGK1-203ENST00000476531 CACNA1SQ13698 1873 aa13.91□□□□□ -0.18
PGK1-203ENST00000476531 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
PGK1-203ENST00000476531 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
PGK1-203ENST00000476531 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
PGK1-203ENST00000476531 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
PGK1-203ENST00000476531 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
PGK1-203ENST00000476531 RGL2O15211 777 aa13.9□□□□□ -0.18
PGK1-203ENST00000476531 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
PGK1-203ENST00000476531 NPR1P16066 1061 aa13.9□□□□□ -0.18
PGK1-203ENST00000476531 MCM10Q7L590 875 aa13.9□□□□□ -0.18
PGK1-203ENST00000476531 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
PGK1-203ENST00000476531 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
PGK1-203ENST00000476531 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.19
PGK1-203ENST00000476531 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 IQCA1LA6NCM1 817 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 SLC34A2O95436 690 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
PGK1-203ENST00000476531 OLFM4Q6UX06 510 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
PGK1-203ENST00000476531 TPTE2Q6XPS3 522 aa13.88□□□□□ -0.19
PGK1-203ENST00000476531 ZNF277Q9NRM2 450 aaPredicted RBP13.88□□□□□ -0.19
PGK1-203ENST00000476531 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
PGK1-203ENST00000476531 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
PGK1-203ENST00000476531 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
PGK1-203ENST00000476531 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
PGK1-203ENST00000476531 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
PGK1-203ENST00000476531 SNED1Q8TER0 1413 aa13.87□□□□□ -0.19
PGK1-203ENST00000476531 SCN4AP35499 1836 aa13.87□□□□□ -0.19
PGK1-203ENST00000476531 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
PGK1-203ENST00000476531 FOXN1O15353 648 aa13.86□□□□□ -0.19
PGK1-203ENST00000476531 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
PGK1-203ENST00000476531 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
PGK1-203ENST00000476531 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.195e-66■■■□□ 18.4
PGK1-203ENST00000476531 HLFQ16534 295 aa13.86□□□□□ -0.19
PGK1-203ENST00000476531 RTKN2Q8IZC4 609 aa13.86□□□□□ -0.19
PGK1-203ENST00000476531 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
PGK1-203ENST00000476531 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
PGK1-203ENST00000476531 FZD9O00144 591 aa13.85□□□□□ -0.19
PGK1-203ENST00000476531 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
PGK1-203ENST00000476531 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 TMEM88BA6NKF7 163 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 EPHX2P34913 555 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
PGK1-203ENST00000476531 VEGFBP49765 207 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
PGK1-203ENST00000476531 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 PRDM10Q9NQV6 1147 aa13.84□□□□□ -0.19
PGK1-203ENST00000476531 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
PGK1-203ENST00000476531 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
PGK1-203ENST00000476531 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
PGK1-203ENST00000476531 CRY2Q49AN0 593 aa13.83□□□□□ -0.2
PGK1-203ENST00000476531 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
PGK1-203ENST00000476531 PSMD1Q99460 953 aa13.83□□□□□ -0.2
PGK1-203ENST00000476531 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
PGK1-203ENST00000476531 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms