RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 HTTP42858 3142 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 SOS1Q07889 1333 aaPredicted RBP9.1□□□□□ -0.95
CLDN4-205ENST00000476494 CEP290O15078 2479 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 CENPFP49454 3210 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 ZPR1O75312 459 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 EPS15P42566 896 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 SCNN1DP51172 638 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 HDGFL2Q7Z4V5 671 aaPredicted RBP9.1□□□□□ -0.95
CLDN4-205ENST00000476494 RNF186Q9NXI6 227 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
CLDN4-205ENST00000476494 PRPF40BQ6NWY9 871 aaKnown RBP9.09□□□□□ -0.95
CLDN4-205ENST00000476494 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 COL4A5P29400 1685 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
CLDN4-205ENST00000476494 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
CLDN4-205ENST00000476494 SRGNP10124 158 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
CLDN4-205ENST00000476494 SOGA3Q5TF21 947 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 USP50Q70EL3 339 aaPredicted RBP9.08□□□□□ -0.96
CLDN4-205ENST00000476494 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
CLDN4-205ENST00000476494 TERF2IPQ9NYB0 399 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 PGAP2Q9UHJ9 254 aa9.08□□□□□ -0.96
CLDN4-205ENST00000476494 TRPA1O75762 1119 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 PDE6BP35913 854 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLDN4-205ENST00000476494 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
CLDN4-205ENST00000476494 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 PRR5LQ6MZQ0 368 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 TMC1Q8TDI8 760 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
CLDN4-205ENST00000476494 FYB1O15117 783 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 OLFM4Q6UX06 510 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 FLT4P35916 1363 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
CLDN4-205ENST00000476494 POTEFA5A3E0 1075 aa9.05□□□□□ -0.96
CLDN4-205ENST00000476494 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
CLDN4-205ENST00000476494 KIF23Q02241 960 aaPredicted RBP9.05□□□□□ -0.96
CLDN4-205ENST00000476494 BICDL1Q6ZP65 573 aa9.05□□□□□ -0.96
CLDN4-205ENST00000476494 SYNE4Q8N205 404 aa9.05□□□□□ -0.96
CLDN4-205ENST00000476494 PUS7Q96PZ0 661 aaKnown RBP9.05□□□□□ -0.96
CLDN4-205ENST00000476494 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
CLDN4-205ENST00000476494 EYA1Q99502 592 aa9.05□□□□□ -0.96
CLDN4-205ENST00000476494 COL15A1P39059 1388 aa9.04□□□□□ -0.96
CLDN4-205ENST00000476494 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
CLDN4-205ENST00000476494 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
CLDN4-205ENST00000476494 TBC1D9BQ66K14 1250 aa9.04□□□□□ -0.96
CLDN4-205ENST00000476494 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
CLDN4-205ENST00000476494 MASTLQ96GX5 879 aa9.04□□□□□ -0.96
CLDN4-205ENST00000476494 GLIS2Q9BZE0 524 aaPredicted RBP9.04□□□□□ -0.96
CLDN4-205ENST00000476494 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
CLDN4-205ENST00000476494 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
CLDN4-205ENST00000476494 PAPPA2Q9BXP8 1791 aa9.03□□□□□ -0.96
CLDN4-205ENST00000476494 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
CLDN4-205ENST00000476494 KLRG2A4D1S0 409 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-205ENST00000476494 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-205ENST00000476494 HUNKP57058 714 aa9.02□□□□□ -0.97
CLDN4-205ENST00000476494 FBXO46Q6PJ61 603 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-205ENST00000476494 DLK2Q6UY11 383 aa9.02□□□□□ -0.97
CLDN4-205ENST00000476494 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
CLDN4-205ENST00000476494 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
CLDN4-205ENST00000476494 VCANP13611 3396 aa9.02□□□□□ -0.97
CLDN4-205ENST00000476494 CABP4P57796 275 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 RTKN2Q8IZC4 609 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-205ENST00000476494 COL25A1Q9BXS0 654 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-205ENST00000476494 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 EMILIN1Q9Y6C2 1016 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CLDN4-205ENST00000476494 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
CLDN4-205ENST00000476494 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
CLDN4-205ENST00000476494 PSMD1Q99460 953 aa9□□□□□ -0.97
CLDN4-205ENST00000476494 ADARB2Q9NS39 739 aaKnown RBP9□□□□□ -0.97
CLDN4-205ENST00000476494 GPRC5DQ9NZD1 345 aa9□□□□□ -0.97
CLDN4-205ENST00000476494 ANKRD26Q9UPS8 1709 aa9□□□□□ -0.97
CLDN4-205ENST00000476494 HSP90AB1P08238 724 aaKnown RBP8.99□□□□□ -0.97
CLDN4-205ENST00000476494 NEUROD1Q13562 356 aa8.99□□□□□ -0.97
CLDN4-205ENST00000476494 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
CLDN4-205ENST00000476494 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
CLDN4-205ENST00000476494 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
CLDN4-205ENST00000476494 PRO3102Q9H379 93 aa8.99□□□□□ -0.97
CLDN4-205ENST00000476494 WASHC2AQ641Q2 1341 aa8.99□□□□□ -0.97
CLDN4-205ENST00000476494 SLC10A3P09131 477 aa8.98□□□□□ -0.97
CLDN4-205ENST00000476494 EIF6P56537 245 aaKnown RBP8.98□□□□□ -0.97
CLDN4-205ENST00000476494 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
CLDN4-205ENST00000476494 JDP2Q8WYK2 163 aa8.98□□□□□ -0.97
CLDN4-205ENST00000476494 SIN3AQ96ST3 1273 aa8.98□□□□□ -0.97
CLDN4-205ENST00000476494 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
CLDN4-205ENST00000476494 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
CLDN4-205ENST00000476494 H0YGN5 161 aa8.97□□□□□ -0.97
CLDN4-205ENST00000476494 NPR1P16066 1061 aa8.97□□□□□ -0.97
CLDN4-205ENST00000476494 EN2P19622 333 aaPredicted RBP8.97□□□□□ -0.97
CLDN4-205ENST00000476494 L3MBTL2Q969R5 705 aa8.97□□□□□ -0.97
CLDN4-205ENST00000476494 SCN7AQ01118 1682 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms