RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 CLEC4GQ6UXB4 293 aa27.16■■□□□ 1.94
MAP1LC3A-204ENST00000476428 CHPF2Q9P2E5 772 aa27.16■■□□□ 1.94
MAP1LC3A-204ENST00000476428 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
MAP1LC3A-204ENST00000476428 HLFQ16534 295 aa27.15■■□□□ 1.94
MAP1LC3A-204ENST00000476428 SERPINB2P05120 415 aa27.14■■□□□ 1.94
MAP1LC3A-204ENST00000476428 ERVV-1B6SEH8 477 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 RGL2O15211 777 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 GOLGA2Q08379 1002 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 GPR162Q16538 588 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 KIF6Q6ZMV9 814 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 DBF4Q9UBU7 674 aaPredicted RBP27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 ZNF652Q9Y2D9 606 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 MAP3K15Q6ZN16 1313 aa27.13■■□□□ 1.93
MAP1LC3A-204ENST00000476428 COPS6Q7L5N1 327 aa27.12■■□□□ 1.93
MAP1LC3A-204ENST00000476428 XAGE3Q8WTP9 111 aa27.12■■□□□ 1.93
MAP1LC3A-204ENST00000476428 SETDB2Q96T68 719 aa27.12■■□□□ 1.93
MAP1LC3A-204ENST00000476428 ZBTB3Q9H5J0 574 aa27.11■■□□□ 1.93
MAP1LC3A-204ENST00000476428 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
MAP1LC3A-204ENST00000476428 AIMP1Q12904 312 aaKnown RBP27.1■■□□□ 1.93
MAP1LC3A-204ENST00000476428 TWISTNBQ3B726 338 aaPredicted RBP27.1■■□□□ 1.93
MAP1LC3A-204ENST00000476428 EXOSC9Q06265 439 aaKnown RBP27.09■■□□□ 1.93
MAP1LC3A-204ENST00000476428 C10orf71Q711Q0 1435 aa27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 SCN7AQ01118 1682 aa27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 CHMP4AQ9BY43 222 aa27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 HYPKQ9NX55 129 aa27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 NIP7Q9Y221 180 aaKnown RBP eCLIP27.08■■□□□ 1.93
MAP1LC3A-204ENST00000476428 CARMIL3Q8ND23 1372 aa27.07■■□□□ 1.92
MAP1LC3A-204ENST00000476428 TGFB2P61812 414 aa27.06■■□□□ 1.92
MAP1LC3A-204ENST00000476428 GIGYF2Q6Y7W6 1299 aaKnown RBP27.06■■□□□ 1.92
MAP1LC3A-204ENST00000476428 VAMP4O75379 141 aa27.05■■□□□ 1.92
MAP1LC3A-204ENST00000476428 IFFO2Q5TF58 517 aa27.05■■□□□ 1.92
MAP1LC3A-204ENST00000476428 E9PSI1 815 aa27.04■■□□□ 1.92
MAP1LC3A-204ENST00000476428 TCERG1O14776 1098 aaKnown RBP27.04■■□□□ 1.92
MAP1LC3A-204ENST00000476428 SLFN5Q08AF3 891 aa27.04■■□□□ 1.92
MAP1LC3A-204ENST00000476428 PELP1Q8IZL8 1130 aaKnown RBP27.04■■□□□ 1.92
MAP1LC3A-204ENST00000476428 A0A0G2JLW4 131 aa27.03■■□□□ 1.92
MAP1LC3A-204ENST00000476428 PRR5LQ6MZQ0 368 aa27.03■■□□□ 1.92
MAP1LC3A-204ENST00000476428 BCORQ6W2J9 1755 aa27.03■■□□□ 1.92
MAP1LC3A-204ENST00000476428 CDCA7LQ96GN5 454 aa27.03■■□□□ 1.92
MAP1LC3A-204ENST00000476428 PHAXQ9H814 394 aaKnown RBP27.03■■□□□ 1.92
MAP1LC3A-204ENST00000476428 DPEP1P16444 411 aa27.02■■□□□ 1.92
MAP1LC3A-204ENST00000476428 ANKRD13DQ6ZTN6 518 aa27.02■■□□□ 1.92
MAP1LC3A-204ENST00000476428 ZNF34Q8IZ26 560 aa27.02■■□□□ 1.92
MAP1LC3A-204ENST00000476428 CCDC24Q8N4L8 307 aa27.02■■□□□ 1.92
MAP1LC3A-204ENST00000476428 GPTP24298 496 aa27.01■■□□□ 1.91
MAP1LC3A-204ENST00000476428 NBPF5PQ86XG9 351 aaPredicted RBP27.01■■□□□ 1.91
MAP1LC3A-204ENST00000476428 PLBD2Q8NHP8 589 aa27.01■■□□□ 1.91
MAP1LC3A-204ENST00000476428 FAM177BA6PVY3 158 aa27■■□□□ 1.91
MAP1LC3A-204ENST00000476428 CNBD1Q8NA66 436 aa27■■□□□ 1.91
MAP1LC3A-204ENST00000476428 STK31Q9BXU1 1019 aa27■■□□□ 1.91
MAP1LC3A-204ENST00000476428 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
MAP1LC3A-204ENST00000476428 ATP10DQ9P241 1426 aa26.99■■□□□ 1.91
MAP1LC3A-204ENST00000476428 TPTE2Q6XPS3 522 aa26.99■■□□□ 1.91
MAP1LC3A-204ENST00000476428 UBN2Q6ZU65 1347 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 NPHP1O15259 732 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 SLC4A2P04920 1241 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 KCNA3P22001 575 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 CHRNA5P30532 468 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 TCIRG1Q13488 830 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 WWC3Q9ULE0 1092 aa26.98■■□□□ 1.91
MAP1LC3A-204ENST00000476428 HSP90AB3PQ58FF7 597 aa26.97■■□□□ 1.91
MAP1LC3A-204ENST00000476428 TRMT2AQ8IZ69 625 aaKnown RBP26.97■■□□□ 1.91
MAP1LC3A-204ENST00000476428 BRIP1Q9BX63 1249 aa26.97■■□□□ 1.91
MAP1LC3A-204ENST00000476428 NRXN2Q9P2S2 1712 aa26.96■■□□□ 1.91
MAP1LC3A-204ENST00000476428 YBX3P16989 372 aaKnown RBP eCLIP26.96■■□□□ 1.91
MAP1LC3A-204ENST00000476428 ST5P78524 1137 aa26.96■■□□□ 1.91
MAP1LC3A-204ENST00000476428 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
MAP1LC3A-204ENST00000476428 SUSD4Q5VX71 490 aa26.96■■□□□ 1.91
MAP1LC3A-204ENST00000476428 G2E3Q7L622 706 aa26.95■■□□□ 1.9
MAP1LC3A-204ENST00000476428 PARP10Q53GL7 1025 aa26.94■■□□□ 1.9
MAP1LC3A-204ENST00000476428 RIC3Q7Z5B4 369 aa26.94■■□□□ 1.9
MAP1LC3A-204ENST00000476428 NYXQ9GZU5 481 aa26.94■■□□□ 1.9
MAP1LC3A-204ENST00000476428 AFDNP55196 1824 aaKnown RBP26.94■■□□□ 1.9
MAP1LC3A-204ENST00000476428 KIF13BQ9NQT8 1826 aa26.94■■□□□ 1.9
MAP1LC3A-204ENST00000476428 GTF2E1P29083 439 aaPredicted RBP26.93■■□□□ 1.9
MAP1LC3A-204ENST00000476428 PDE6BP35913 854 aa26.93■■□□□ 1.9
MAP1LC3A-204ENST00000476428 C2CD5Q86YS7 1000 aa26.93■■□□□ 1.9
MAP1LC3A-204ENST00000476428 CEP350Q5VT06 3117 aa26.92■■□□□ 1.9
MAP1LC3A-204ENST00000476428 PPP1R42Q7Z4L9 355 aa26.92■■□□□ 1.9
MAP1LC3A-204ENST00000476428 NLRP10Q86W26 655 aa26.92■■□□□ 1.9
MAP1LC3A-204ENST00000476428 NUTM1Q86Y26 1132 aa26.92■■□□□ 1.9
MAP1LC3A-204ENST00000476428 PIM2Q9P1W9 311 aa26.92■■□□□ 1.9
MAP1LC3A-204ENST00000476428 H0YIN7 160 aa26.91■■□□□ 1.9
MAP1LC3A-204ENST00000476428 NTSR2O95665 410 aa26.91■■□□□ 1.9
MAP1LC3A-204ENST00000476428 DDX58O95786 925 aaKnown RBP26.91■■□□□ 1.9
MAP1LC3A-204ENST00000476428 ERFEQ4G0M1 354 aa26.91■■□□□ 1.9
MAP1LC3A-204ENST00000476428 ISCA1Q9BUE6 129 aa26.91■■□□□ 1.9
MAP1LC3A-204ENST00000476428 ATP5J2-PTCD1G3V325 749 aa26.9■■□□□ 1.9
MAP1LC3A-204ENST00000476428 UTP14AQ9BVJ6 771 aaKnown RBP26.9■■□□□ 1.9
MAP1LC3A-204ENST00000476428 NUP98P52948 1817 aa26.9■■□□□ 1.9
MAP1LC3A-204ENST00000476428 IBTKQ9P2D0 1353 aaPredicted RBP26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 KSR2Q6VAB6 950 aa26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 PDZRN3Q9UPQ7 1066 aa26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 BCS1LQ9Y276 419 aa26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 GOLGB1Q14789 3259 aaKnown RBP26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 KIAA1551Q9HCM1 1747 aa26.89■■□□□ 1.9
MAP1LC3A-204ENST00000476428 GRIN3BO60391 1043 aa26.88■■□□□ 1.89
MAP1LC3A-204ENST00000476428 FLIIQ13045 1269 aa26.88■■□□□ 1.89
MAP1LC3A-204ENST00000476428 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms