RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ADAMTS7Q9UKP4 1686 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 CHD2O14647 1828 aaKnown RBP10.11□□□□□ -0.79
VAPB-205ENST00000476395 PIBF1Q8WXW3 757 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 TTC14Q96N46 770 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 PHAXQ9H814 394 aaKnown RBP10.11□□□□□ -0.79
VAPB-205ENST00000476395 PYCARDQ9ULZ3 195 aa10.11□□□□□ -0.79
VAPB-205ENST00000476395 LRRFIP2Q9Y608 721 aaKnown RBP10.11□□□□□ -0.79
VAPB-205ENST00000476395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.11□□□□□ -0.79
VAPB-205ENST00000476395 CAMTA1Q9Y6Y1 1673 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 SOX12O15370 315 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 REC8O95072 547 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 GNAI2P04899 355 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
VAPB-205ENST00000476395 NEK4P51957 841 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 KCNG1Q9UIX4 513 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 FAM193AP78312 1265 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 ZBTB9Q96C00 473 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 TTC21AQ8NDW8 1320 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 IRX5P78411 483 aaPredicted RBP10.1□□□□□ -0.79
VAPB-205ENST00000476395 LRRCC1Q9C099 1032 aa10.1□□□□□ -0.79
VAPB-205ENST00000476395 ST18O60284 1047 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 HOXC9P31274 260 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 HSPA4P34932 840 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 KCNJ4P48050 445 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 SLC26A8Q96RN1 970 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
VAPB-205ENST00000476395 AP5Z1O43299 807 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 GTF2F1P35269 517 aaKnown RBP eCLIP10.09□□□□□ -0.79
VAPB-205ENST00000476395 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 RNF216Q9NWF9 866 aaPredicted RBP10.09□□□□□ -0.79
VAPB-205ENST00000476395 ADCY5O95622 1261 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 TSPY26PQ9H489 355 aa10.09□□□□□ -0.79
VAPB-205ENST00000476395 HCLS1P14317 486 aaPredicted RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 INTS4Q96HW7 963 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 ADCY9O60503 1353 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 C5P01031 1676 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 ANAPC15P60006 121 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 KCNF1Q9H3M0 494 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 PXDNQ92626 1479 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 ERICH4A6NGS2 130 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 FKBP5Q13451 457 aaPredicted RBP10.08□□□□□ -0.8
VAPB-205ENST00000476395 PRIMPOLQ96LW4 560 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
VAPB-205ENST00000476395 AOX1Q06278 1338 aa10.07□□□□□ -0.8
VAPB-205ENST00000476395 LARGE1O95461 756 aa10.07□□□□□ -0.8
VAPB-205ENST00000476395 NBPF7P0C2Y1 421 aaPredicted RBP10.07□□□□□ -0.8
VAPB-205ENST00000476395 NCAPD2Q15021 1401 aa10.07□□□□□ -0.8
VAPB-205ENST00000476395 IL1RAPL2Q9NP60 686 aa10.07□□□□□ -0.8
VAPB-205ENST00000476395 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
VAPB-205ENST00000476395 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
VAPB-205ENST00000476395 KCNQ3O43525 872 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 NUTM1Q86Y26 1132 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 HMMRO75330 724 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 MAP4K4O95819 1239 aaPredicted RBP10.06□□□□□ -0.8
VAPB-205ENST00000476395 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
VAPB-205ENST00000476395 RAD50Q92878 1312 aa10.06□□□□□ -0.8
VAPB-205ENST00000476395 SGSM2O43147 1006 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
VAPB-205ENST00000476395 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
VAPB-205ENST00000476395 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 RGPD5Q99666 1765 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 ANKARQ7Z5J8 1434 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 OS9Q13438 667 aaPredicted RBP10.05□□□□□ -0.8
VAPB-205ENST00000476395 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 USP48Q86UV5 1035 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 THEMISQ8N1K5 641 aaPredicted RBP10.05□□□□□ -0.8
VAPB-205ENST00000476395 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 HEG1Q9ULI3 1381 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 CASC1Q6TDU7 716 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 USHBP1Q8N6Y0 703 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 LGR6Q9HBX8 967 aa10.05□□□□□ -0.8
VAPB-205ENST00000476395 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 CPA1P15085 419 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 CCDC30Q5VVM6 783 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
VAPB-205ENST00000476395 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.8
VAPB-205ENST00000476395 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
VAPB-205ENST00000476395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
VAPB-205ENST00000476395 APPP05067 770 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 GNAI3P08754 354 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 KCNB2Q92953 911 aa10.04□□□□□ -0.8
VAPB-205ENST00000476395 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms