RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
CCNL1-217ENST00000476367 KLHL34Q8N239 644 aa18.53■□□□□ 0.56
CCNL1-217ENST00000476367 DDX21Q9NR30 783 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCNL1-217ENST00000476367 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
CCNL1-217ENST00000476367 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.55
CCNL1-217ENST00000476367 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.55
CCNL1-217ENST00000476367 AIMP1Q12904 312 aaKnown RBP18.51■□□□□ 0.55
CCNL1-217ENST00000476367 ZBTB3Q9H5J0 574 aa18.51■□□□□ 0.55
CCNL1-217ENST00000476367 ANKRD36CQ5JPF3 1778 aa18.51■□□□□ 0.55
CCNL1-217ENST00000476367 ARFGEF2Q9Y6D5 1785 aa18.5■□□□□ 0.55
CCNL1-217ENST00000476367 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
CCNL1-217ENST00000476367 XAGE3Q8WTP9 111 aa18.5■□□□□ 0.55
CCNL1-217ENST00000476367 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
CCNL1-217ENST00000476367 DDR1Q08345 913 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 NFIXQ14938 502 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 G2E3Q7L622 706 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
CCNL1-217ENST00000476367 STK31Q9BXU1 1019 aa18.49■□□□□ 0.55
CCNL1-217ENST00000476367 FHDC1Q9C0D6 1143 aaPredicted RBP18.49■□□□□ 0.55
CCNL1-217ENST00000476367 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
CCNL1-217ENST00000476367 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
CCNL1-217ENST00000476367 HLFQ16534 295 aa18.48■□□□□ 0.55
CCNL1-217ENST00000476367 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
CCNL1-217ENST00000476367 NRXN2Q9P2S2 1712 aa18.48■□□□□ 0.55
CCNL1-217ENST00000476367 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
CCNL1-217ENST00000476367 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
CCNL1-217ENST00000476367 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
CCNL1-217ENST00000476367 KIF13BQ9NQT8 1826 aa18.47■□□□□ 0.55
CCNL1-217ENST00000476367 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
CCNL1-217ENST00000476367 TM4SF1P30408 202 aa18.46■□□□□ 0.55
CCNL1-217ENST00000476367 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
CCNL1-217ENST00000476367 CARMIL3Q8ND23 1372 aa18.46■□□□□ 0.55
CCNL1-217ENST00000476367 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
CCNL1-217ENST00000476367 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
CCNL1-217ENST00000476367 BCAR3O75815 825 aa18.45■□□□□ 0.54
CCNL1-217ENST00000476367 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
CCNL1-217ENST00000476367 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCNL1-217ENST00000476367 C10orf71Q711Q0 1435 aa18.44■□□□□ 0.54
CCNL1-217ENST00000476367 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
CCNL1-217ENST00000476367 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
CCNL1-217ENST00000476367 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
CCNL1-217ENST00000476367 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
CCNL1-217ENST00000476367 N4BP2Q86UW6 1770 aaPredicted RBP18.44■□□□□ 0.54
CCNL1-217ENST00000476367 SERPINB2P05120 415 aa18.43■□□□□ 0.54
CCNL1-217ENST00000476367 GPTP24298 496 aa18.43■□□□□ 0.54
CCNL1-217ENST00000476367 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
CCNL1-217ENST00000476367 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
CCNL1-217ENST00000476367 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
CCNL1-217ENST00000476367 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
CCNL1-217ENST00000476367 RGL2O15211 777 aa18.42■□□□□ 0.54
CCNL1-217ENST00000476367 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
CCNL1-217ENST00000476367 NPHP1O15259 732 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 ANKRD13DQ6ZTN6 518 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 ADCY9O60503 1353 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 FLIIQ13045 1269 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
CCNL1-217ENST00000476367 GOLGB1Q14789 3259 aaKnown RBP18.4■□□□□ 0.54
CCNL1-217ENST00000476367 RIC3Q7Z5B4 369 aa18.4■□□□□ 0.54
CCNL1-217ENST00000476367 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
CCNL1-217ENST00000476367 CCDC24Q8N4L8 307 aa18.4■□□□□ 0.54
CCNL1-217ENST00000476367 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
CCNL1-217ENST00000476367 CNBD1Q8NA66 436 aa18.39■□□□□ 0.53
CCNL1-217ENST00000476367 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.53
CCNL1-217ENST00000476367 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.53
CCNL1-217ENST00000476367 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
CCNL1-217ENST00000476367 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 TNNQ9UQP3 1299 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
CCNL1-217ENST00000476367 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 ZNF34Q8IZ26 560 aa18.38■□□□□ 0.53
CCNL1-217ENST00000476367 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
CCNL1-217ENST00000476367 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
CCNL1-217ENST00000476367 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
CCNL1-217ENST00000476367 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
CCNL1-217ENST00000476367 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
CCNL1-217ENST00000476367 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
CCNL1-217ENST00000476367 BRCA1P38398 1863 aaKnown RBP18.36■□□□□ 0.53
CCNL1-217ENST00000476367 UTRNP46939 3433 aa18.36■□□□□ 0.53
CCNL1-217ENST00000476367 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
CCNL1-217ENST00000476367 ATP5J2-PTCD1G3V325 749 aa18.36■□□□□ 0.53
CCNL1-217ENST00000476367 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
CCNL1-217ENST00000476367 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 F6X3S4 739 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 ST5P78524 1137 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 MYD88Q99836 296 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
CCNL1-217ENST00000476367 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
CCNL1-217ENST00000476367 PARP10Q53GL7 1025 aa18.34■□□□□ 0.53
CCNL1-217ENST00000476367 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
CCNL1-217ENST00000476367 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms