RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
MRPL55-228ENST00000476267 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
MRPL55-228ENST00000476267 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
MRPL55-228ENST00000476267 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
MRPL55-228ENST00000476267 POTECB2RU33 542 aa17.51■□□□□ 0.39
MRPL55-228ENST00000476267 RGL2O15211 777 aa17.51■□□□□ 0.39
MRPL55-228ENST00000476267 SRGNP10124 158 aa17.51■□□□□ 0.39
MRPL55-228ENST00000476267 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
MRPL55-228ENST00000476267 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
MRPL55-228ENST00000476267 C21orf2O43822 256 aa17.5■□□□□ 0.39
MRPL55-228ENST00000476267 HTRA3P83110 453 aa17.5■□□□□ 0.39
MRPL55-228ENST00000476267 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
MRPL55-228ENST00000476267 ZNF622Q969S3 477 aaKnown RBP eCLIP17.5■□□□□ 0.39
MRPL55-228ENST00000476267 SMC1BQ8NDV3 1235 aa17.49■□□□□ 0.39
MRPL55-228ENST00000476267 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
MRPL55-228ENST00000476267 VEGFAP15692 232 aaPredicted RBP17.48■□□□□ 0.39
MRPL55-228ENST00000476267 ST5P78524 1137 aa17.48■□□□□ 0.39
MRPL55-228ENST00000476267 JMYQ8N9B5 988 aa17.48■□□□□ 0.39
MRPL55-228ENST00000476267 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
MRPL55-228ENST00000476267 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
MRPL55-228ENST00000476267 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
MRPL55-228ENST00000476267 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
MRPL55-228ENST00000476267 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
MRPL55-228ENST00000476267 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
MRPL55-228ENST00000476267 CNKSR1Q969H4 720 aa17.47■□□□□ 0.39
MRPL55-228ENST00000476267 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
MRPL55-228ENST00000476267 NUP98P52948 1817 aa17.47■□□□□ 0.39
MRPL55-228ENST00000476267 PCNTO95613 3336 aa17.46■□□□□ 0.39
MRPL55-228ENST00000476267 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
MRPL55-228ENST00000476267 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
MRPL55-228ENST00000476267 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
MRPL55-228ENST00000476267 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
MRPL55-228ENST00000476267 ZNF652Q9Y2D9 606 aa17.45■□□□□ 0.38
MRPL55-228ENST00000476267 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
MRPL55-228ENST00000476267 HLFQ16534 295 aa17.44■□□□□ 0.38
MRPL55-228ENST00000476267 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
MRPL55-228ENST00000476267 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
MRPL55-228ENST00000476267 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
MRPL55-228ENST00000476267 NPR1P16066 1061 aa17.42■□□□□ 0.38
MRPL55-228ENST00000476267 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
MRPL55-228ENST00000476267 SCN4AP35499 1836 aa17.42■□□□□ 0.38
MRPL55-228ENST00000476267 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
MRPL55-228ENST00000476267 NPHP1O15259 732 aa17.41■□□□□ 0.38
MRPL55-228ENST00000476267 EIF4A1P60842 406 aaKnown RBP17.41■□□□□ 0.38
MRPL55-228ENST00000476267 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
MRPL55-228ENST00000476267 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
MRPL55-228ENST00000476267 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
MRPL55-228ENST00000476267 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
MRPL55-228ENST00000476267 ADAMTSL1Q8N6G6 1762 aa17.4■□□□□ 0.38
MRPL55-228ENST00000476267 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
MRPL55-228ENST00000476267 DDNO94850 711 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-228ENST00000476267 CRY2Q49AN0 593 aa17.39■□□□□ 0.37
MRPL55-228ENST00000476267 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
MRPL55-228ENST00000476267 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.37
MRPL55-228ENST00000476267 IBTKQ9P2D0 1353 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-228ENST00000476267 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
MRPL55-228ENST00000476267 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-228ENST00000476267 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
MRPL55-228ENST00000476267 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
MRPL55-228ENST00000476267 POTEJP0CG39 1038 aa17.37■□□□□ 0.37
MRPL55-228ENST00000476267 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
MRPL55-228ENST00000476267 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
MRPL55-228ENST00000476267 UBN2Q6ZU65 1347 aa17.37■□□□□ 0.37
MRPL55-228ENST00000476267 COL4A5P29400 1685 aa17.36■□□□□ 0.37
MRPL55-228ENST00000476267 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
MRPL55-228ENST00000476267 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
MRPL55-228ENST00000476267 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
MRPL55-228ENST00000476267 NEFMP07197 916 aa17.35■□□□□ 0.37
MRPL55-228ENST00000476267 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
MRPL55-228ENST00000476267 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
MRPL55-228ENST00000476267 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 NYXQ9GZU5 481 aa17.34■□□□□ 0.37
MRPL55-228ENST00000476267 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
MRPL55-228ENST00000476267 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
MRPL55-228ENST00000476267 NGEFQ8N5V2 710 aa17.33■□□□□ 0.36
MRPL55-228ENST00000476267 PNNQ9H307 717 aaKnown RBP17.33■□□□□ 0.36
MRPL55-228ENST00000476267 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
MRPL55-228ENST00000476267 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
MRPL55-228ENST00000476267 LAMB2P55268 1798 aa17.33■□□□□ 0.36
MRPL55-228ENST00000476267 LTBP1Q14766 1721 aa17.33■□□□□ 0.36
MRPL55-228ENST00000476267 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 FZD9O00144 591 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 NTSR2O95665 410 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 MYL6BP14649 208 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 PDIA6Q15084 440 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 COL13A1Q5TAT6 717 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-228ENST00000476267 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 KIF6Q6ZMV9 814 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 PSMD1Q99460 953 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
MRPL55-228ENST00000476267 TAF1DQ9H5J8 278 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-228ENST00000476267 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
MRPL55-228ENST00000476267 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
MRPL55-228ENST00000476267 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
MRPL55-228ENST00000476267 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
MRPL55-228ENST00000476267 GPTP24298 496 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms