RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 IVLP07476 585 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 PTPN14Q15678 1187 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 ZNF530Q6P9A1 599 aaPredicted RBP7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 ABCC4O15439 1325 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 DDX58O95786 925 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 ANXA1P04083 346 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 STIM1Q13586 685 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 RIC3Q7Z5B4 369 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 CFAP57Q96MR6 1250 aa7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 PAIP2Q9BPZ3 127 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 RNF17Q9BXT8 1623 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-208ENST00000475997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 CCDC175P0C221 793 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 JAKMIP3Q5VZ66 844 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 GAS2L3Q86XJ1 694 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 FMNL2Q96PY5 1086 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 NOL10Q9BSC4 688 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 TNMDQ9H2S6 317 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 PPP6R1Q9UPN7 881 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 KRT85P78386 507 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 SPECC1LQ69YQ0 1117 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 SIL1Q9H173 461 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 CFAP45Q9UL16 551 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 NEMFO60524 1076 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 IMMTQ16891 758 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 ARHGAP29Q52LW3 1261 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 PPP1R42Q7Z4L9 355 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 KIF1BPQ96EK5 621 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 CEP63Q96MT8 703 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 ESYT1Q9BSJ8 1104 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 PRDM10Q9NQV6 1147 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 YEATS2Q9ULM3 1422 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 GTF2F1P35269 517 aaKnown RBP eCLIP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 PRIM1P49642 420 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 FAM193AP78312 1265 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 SEPT6Q14141 434 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 FSD1Q9BTV5 496 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 GTPBP4Q9BZE4 634 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
HNRNPU-208ENST00000475997 IQGAP1P46940 1657 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 MSH6P52701 1360 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 XPCQ01831 940 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 STK38Q15208 465 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 PLEKHO1Q53GL0 409 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 THEMISQ8N1K5 641 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 JAKMIP1Q96N16 626 aaKnown RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 ZHX1Q9UKY1 873 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 FSD2A1L4K1 749 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 SMTNL1A8MU46 457 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 G3V3G9 751 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 DCAF8Q5TAQ9 597 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 TAF4BQ92750 862 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 EYA1Q99502 592 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 EDC4Q6P2E9 1401 aaKnown RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 MAP3K19Q56UN5 1328 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 CASTP20810 708 aaKnown RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 TDO2P48775 406 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 ATP8B2P98198 1209 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 PI4KAP2A4QPH2 592 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 BTBD11A6QL63 1104 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 PKP1Q13835 747 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 FAM114A1Q8IWE2 563 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 CCAR1Q8IX12 1150 aaKnown RBP7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 PI4KAP1Q8N8J0 262 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 MLH3Q9UHC1 1453 aa7.11□□□□□ -1.27
HNRNPU-208ENST00000475997 CLGNO14967 610 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 EPB41L2O43491 1005 aaKnown RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 BRPF1P55201 1214 aaPredicted RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 RNF187Q5TA31 235 aaPredicted RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 WDR66Q8TBY9 1149 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 RBM28Q9NW13 759 aaKnown RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 TMCO5BA8MYB1 307 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 ZNF853P0CG23 659 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 FOSBP53539 338 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 C6orf163Q5TEZ5 329 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 MPRIPQ6WCQ1 1025 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 AACSQ86V21 672 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 FEZ1Q99689 392 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 ARAP3Q8WWN8 1544 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 HIP1O00291 1037 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 SFPQP23246 707 aaKnown RBP eCLIP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 DAAM2Q86T65 1068 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 FERMT3Q86UX7 667 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 CCDC83Q8IWF9 413 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 KRT222Q8N1A0 295 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 NLRP2Q9NX02 1062 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 GCOM1H8Y6P7 765 aaPredicted RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 RAB11FIP3O75154 756 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 HMGB1P09429 215 aaKnown RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 STK3Q13188 491 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 PRPF40BQ6NWY9 871 aaKnown RBP7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 CHAMP1Q96JM3 812 aa7.1□□□□□ -1.27
HNRNPU-208ENST00000475997 CPSF2Q9P2I0 782 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms