RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
NUDCD3-206ENST00000475952 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-206ENST00000475952 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 RUNDC1Q96C34 613 aa14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 THUMPD2Q9BTF0 503 aaKnown RBP14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 MIS18AQ9NYP9 233 aa14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 TBC1D2BQ9UPU7 963 aa14.97□□□□□ -0.01
NUDCD3-206ENST00000475952 CHRNA5P30532 468 aa14.96□□□□□ -0.01
NUDCD3-206ENST00000475952 DZIP3Q86Y13 1208 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-206ENST00000475952 CCDC146Q8IYE0 955 aa14.96□□□□□ -0.01
NUDCD3-206ENST00000475952 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
NUDCD3-206ENST00000475952 ZC3H4Q9UPT8 1303 aaKnown RBP14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 SERPINB2P05120 415 aa14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 PIP4K2AP48426 406 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 RASSF7Q02833 373 aa14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
NUDCD3-206ENST00000475952 TBC1D9BQ66K14 1250 aa14.94□□□□□ -0.02
NUDCD3-206ENST00000475952 BICDL1Q6ZP65 573 aa14.94□□□□□ -0.02
NUDCD3-206ENST00000475952 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
NUDCD3-206ENST00000475952 RRP7AQ9Y3A4 280 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-206ENST00000475952 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 CAMTA2O94983 1202 aa14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 EIF4A1P60842 406 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
NUDCD3-206ENST00000475952 SETDB2Q96T68 719 aa14.92□□□□□ -0.02
NUDCD3-206ENST00000475952 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 NBPF26B4DH59 902 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 RGL2O15211 777 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 NPHP1O15259 732 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 VEGFAP15692 232 aaPredicted RBP14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 NBPF10Q6P3W6 841 aaKnown RBP14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 CLEC4GQ6UXB4 293 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 NBPF15Q8N660 670 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 ERBB4Q15303 1308 aa14.91□□□□□ -0.02
NUDCD3-206ENST00000475952 SLX4Q8IY92 1834 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 CACNA1FO60840 1977 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 LMNB1P20700 586 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 ST5P78524 1137 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 PRR5LQ6MZQ0 368 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 CNBD1Q8NA66 436 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
NUDCD3-206ENST00000475952 H0YIN7 160 aa14.88□□□□□ -0.03
NUDCD3-206ENST00000475952 PDE6BP35913 854 aa14.88□□□□□ -0.03
NUDCD3-206ENST00000475952 KIF6Q6ZMV9 814 aa14.88□□□□□ -0.03
NUDCD3-206ENST00000475952 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
NUDCD3-206ENST00000475952 LAMB2P55268 1798 aa14.88□□□□□ -0.03
NUDCD3-206ENST00000475952 POTECB2RU33 542 aa14.87□□□□□ -0.03
NUDCD3-206ENST00000475952 ANP32CO43423 234 aa14.87□□□□□ -0.03
NUDCD3-206ENST00000475952 MYL6BP14649 208 aa14.87□□□□□ -0.03
NUDCD3-206ENST00000475952 C2CD5Q86YS7 1000 aa14.87□□□□□ -0.03
NUDCD3-206ENST00000475952 NBPF5PQ86XG9 351 aaPredicted RBP14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 BRIP1Q9BX63 1249 aa14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 NIP7Q9Y221 180 aaKnown RBP eCLIP14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 MAP3K15Q6ZN16 1313 aa14.86□□□□□ -0.03
NUDCD3-206ENST00000475952 NFKBIEO00221 500 aa14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 CHL1O00533 1208 aa14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 SLC34A2O95436 690 aa14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 CALD1Q05682 793 aaKnown RBP14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 TTLL6Q8N841 843 aa14.85□□□□□ -0.03
NUDCD3-206ENST00000475952 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
NUDCD3-206ENST00000475952 APAF1O14727 1248 aa14.84□□□□□ -0.03
NUDCD3-206ENST00000475952 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
NUDCD3-206ENST00000475952 FOXN1O15353 648 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 HLFQ16534 295 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 TPTE2Q6XPS3 522 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 TTLL7Q6ZT98 887 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 ZNF622Q969S3 477 aaKnown RBP eCLIP14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 CFAP44Q96MT7 982 aa14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 IBTKQ9P2D0 1353 aaPredicted RBP14.83□□□□□ -0.04
NUDCD3-206ENST00000475952 SCN4AP35499 1836 aa14.82□□□□□ -0.04
NUDCD3-206ENST00000475952 HOXB7P09629 217 aa14.82□□□□□ -0.04
NUDCD3-206ENST00000475952 NYXQ9GZU5 481 aa14.82□□□□□ -0.04
NUDCD3-206ENST00000475952 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
NUDCD3-206ENST00000475952 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
NUDCD3-206ENST00000475952 DDX60Q8IY21 1712 aaKnown RBP14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 GTF2E1P29083 439 aaPredicted RBP14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 GNAI1P63096 354 aa14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 CCDC184Q52MB2 194 aa14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 CNTNAP1P78357 1384 aa14.81□□□□□ -0.04
NUDCD3-206ENST00000475952 FAM177BA6PVY3 158 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 PDIA6Q15084 440 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 STYK1Q6J9G0 422 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 CNKSR1Q969H4 720 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 PRDM10Q9NQV6 1147 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 RIC1Q4ADV7 1423 aa14.8□□□□□ -0.04
NUDCD3-206ENST00000475952 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
NUDCD3-206ENST00000475952 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms