RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 HACL1Q9UJ83 578 aa27.56■■■□□ 2
HDAC11-217ENST00000475818 UBR2Q8IWV8 1755 aa27.55■■■□□ 2
HDAC11-217ENST00000475818 VIRMAQ69YN4 1812 aaKnown RBP27.55■■■□□ 2
HDAC11-217ENST00000475818 CACNA1SQ13698 1873 aa27.55■■■□□ 2
HDAC11-217ENST00000475818 ZNF277Q9NRM2 450 aaPredicted RBP27.55■■■□□ 2
HDAC11-217ENST00000475818 SCN4AP35499 1836 aa27.55■■■□□ 2
HDAC11-217ENST00000475818 RASSF10A6NK89 507 aa27.54■■■□□ 2
HDAC11-217ENST00000475818 EPHX2P34913 555 aa27.54■■■□□ 2
HDAC11-217ENST00000475818 CCDC93Q567U6 631 aa27.54■■■□□ 2
HDAC11-217ENST00000475818 MAP1SQ66K74 1059 aaPredicted RBP27.54■■■□□ 2
HDAC11-217ENST00000475818 WDR33Q9C0J8 1336 aaKnown RBP27.53■■■□□ 2
HDAC11-217ENST00000475818 ABT1Q9ULW3 272 aaKnown RBP27.53■■■□□ 2
HDAC11-217ENST00000475818 HEG1Q9ULI3 1381 aa27.52■■■□□ 2
HDAC11-217ENST00000475818 CAMTA2O94983 1202 aa27.52■■■□□ 2
HDAC11-217ENST00000475818 A1BGP04217 495 aa27.52■■■□□ 2
HDAC11-217ENST00000475818 IL6STP40189 918 aaPredicted RBP27.52■■■□□ 2
HDAC11-217ENST00000475818 CNTROBQ8N137 903 aa27.52■■■□□ 2
HDAC11-217ENST00000475818 C7orf43Q8WVR3 580 aa27.52■■■□□ 2
HDAC11-217ENST00000475818 RNF123Q5XPI4 1314 aa27.51■■□□□ 1.99
HDAC11-217ENST00000475818 CCDC85CA6NKD9 419 aa27.51■■□□□ 1.99
HDAC11-217ENST00000475818 MAP2K1Q02750 393 aaPredicted RBP27.51■■□□□ 1.99
HDAC11-217ENST00000475818 OLFM4Q6UX06 510 aa27.51■■□□□ 1.99
HDAC11-217ENST00000475818 NPM2Q86SE8 214 aaKnown RBP27.51■■□□□ 1.99
HDAC11-217ENST00000475818 FKBP4Q02790 459 aaKnown RBP eCLIP27.5■■□□□ 1.99
HDAC11-217ENST00000475818 TEX13AQ9BXU3 409 aaPredicted RBP27.49■■□□□ 1.99
HDAC11-217ENST00000475818 ADAMTSL1Q8N6G6 1762 aa27.48■■□□□ 1.99
HDAC11-217ENST00000475818 ARFGEF2Q9Y6D5 1785 aa27.48■■□□□ 1.99
HDAC11-217ENST00000475818 MLLT1Q03111 559 aaPredicted RBP27.48■■□□□ 1.99
HDAC11-217ENST00000475818 ZNF790Q6PG37 636 aa27.48■■□□□ 1.99
HDAC11-217ENST00000475818 PNMA8AQ86V59 439 aaPredicted RBP27.48■■□□□ 1.99
HDAC11-217ENST00000475818 KNSTRNQ9Y448 316 aa27.48■■□□□ 1.99
HDAC11-217ENST00000475818 TEFQ10587 303 aa27.47■■□□□ 1.99
HDAC11-217ENST00000475818 NBPF5PQ86XG9 351 aaPredicted RBP27.47■■□□□ 1.99
HDAC11-217ENST00000475818 DZIP3Q86Y13 1208 aaKnown RBP27.47■■□□□ 1.99
HDAC11-217ENST00000475818 PAXIP1Q6ZW49 1069 aaPredicted RBP27.46■■□□□ 1.99
HDAC11-217ENST00000475818 NPR1P16066 1061 aa27.45■■□□□ 1.98
HDAC11-217ENST00000475818 PIP4K2AP48426 406 aaPredicted RBP27.45■■□□□ 1.98
HDAC11-217ENST00000475818 GRM1Q13255 1194 aa27.45■■□□□ 1.98
HDAC11-217ENST00000475818 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
HDAC11-217ENST00000475818 FMR1Q06787 632 aaKnown RBP eCLIP27.43■■□□□ 1.98
HDAC11-217ENST00000475818 IL17REQ8NFR9 667 aa27.43■■□□□ 1.98
HDAC11-217ENST00000475818 FMNL2Q96PY5 1086 aa27.43■■□□□ 1.98
HDAC11-217ENST00000475818 IARSP41252 1262 aaKnown RBP27.42■■□□□ 1.98
HDAC11-217ENST00000475818 DDX21Q9NR30 783 aaKnown RBP eCLIP27.42■■□□□ 1.98
HDAC11-217ENST00000475818 FZD9O00144 591 aa27.41■■□□□ 1.98
HDAC11-217ENST00000475818 RTKN2Q8IZC4 609 aa27.41■■□□□ 1.98
HDAC11-217ENST00000475818 SYNE4Q8N205 404 aa27.41■■□□□ 1.98
HDAC11-217ENST00000475818 CAPNS2Q96L46 248 aa27.41■■□□□ 1.98
HDAC11-217ENST00000475818 BEGAINQ9BUH8 593 aa27.41■■□□□ 1.98
HDAC11-217ENST00000475818 DIAPH1O60610 1272 aaKnown RBP27.4■■□□□ 1.98
HDAC11-217ENST00000475818 EIF4G2P78344 907 aaKnown RBP eCLIP27.4■■□□□ 1.98
HDAC11-217ENST00000475818 GPC2Q8N158 579 aa27.4■■□□□ 1.98
HDAC11-217ENST00000475818 TSKSQ9UJT2 592 aa27.4■■□□□ 1.98
HDAC11-217ENST00000475818 BCORQ6W2J9 1755 aa27.4■■□□□ 1.98
HDAC11-217ENST00000475818 FAM177BA6PVY3 158 aa27.39■■□□□ 1.98
HDAC11-217ENST00000475818 KCNQ3O43525 872 aa27.39■■□□□ 1.98
HDAC11-217ENST00000475818 CYP4F22Q6NT55 531 aa27.39■■□□□ 1.98
HDAC11-217ENST00000475818 GJA3Q9Y6H8 435 aa27.39■■□□□ 1.98
HDAC11-217ENST00000475818 GNAT3A8MTJ3 354 aa27.38■■□□□ 1.97
HDAC11-217ENST00000475818 AMER1Q5JTC6 1135 aaPredicted RBP27.38■■□□□ 1.97
HDAC11-217ENST00000475818 CFAP44Q96MT7 982 aa27.38■■□□□ 1.97
HDAC11-217ENST00000475818 RGS19P49795 217 aa27.37■■□□□ 1.97
HDAC11-217ENST00000475818 GPR101Q96P66 508 aaPredicted RBP27.37■■□□□ 1.97
HDAC11-217ENST00000475818 KLRG2A4D1S0 409 aaPredicted RBP27.36■■□□□ 1.97
HDAC11-217ENST00000475818 ECE1P42892 770 aa27.36■■□□□ 1.97
HDAC11-217ENST00000475818 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
HDAC11-217ENST00000475818 ZNF652Q9Y2D9 606 aa27.36■■□□□ 1.97
HDAC11-217ENST00000475818 USP16Q9Y5T5 823 aa27.36■■□□□ 1.97
HDAC11-217ENST00000475818 JDP2Q8WYK2 163 aa27.35■■□□□ 1.97
HDAC11-217ENST00000475818 THSD7BQ9C0I4 1608 aa27.34■■□□□ 1.97
HDAC11-217ENST00000475818 LMOD1P29536 600 aaPredicted RBP27.34■■□□□ 1.97
HDAC11-217ENST00000475818 CLEC4GQ6UXB4 293 aa27.34■■□□□ 1.97
HDAC11-217ENST00000475818 TPTE2Q6XPS3 522 aa27.34■■□□□ 1.97
HDAC11-217ENST00000475818 NIP7Q9Y221 180 aaKnown RBP eCLIP27.34■■□□□ 1.97
HDAC11-217ENST00000475818 PRAMEF22A3QJZ6 481 aa27.33■■□□□ 1.97
HDAC11-217ENST00000475818 TRAF5O00463 557 aa27.33■■□□□ 1.97
HDAC11-217ENST00000475818 EIF6P56537 245 aaKnown RBP27.33■■□□□ 1.97
HDAC11-217ENST00000475818 GAS2L2Q8NHY3 880 aa27.33■■□□□ 1.97
HDAC11-217ENST00000475818 PCDH10Q9P2E7 1040 aa27.33■■□□□ 1.97
HDAC11-217ENST00000475818 BTBD11A6QL63 1104 aa27.32■■□□□ 1.96
HDAC11-217ENST00000475818 U2SURPO15042 1029 aaKnown RBP27.32■■□□□ 1.96
HDAC11-217ENST00000475818 AOC2O75106 756 aa27.32■■□□□ 1.96
HDAC11-217ENST00000475818 EPS15P42566 896 aa27.32■■□□□ 1.96
HDAC11-217ENST00000475818 SIPA1L3O60292 1781 aaPredicted RBP27.32■■□□□ 1.96
HDAC11-217ENST00000475818 LTBP1Q14766 1721 aa27.31■■□□□ 1.96
HDAC11-217ENST00000475818 ALDH1B1P30837 517 aa27.31■■□□□ 1.96
HDAC11-217ENST00000475818 COL4A5P29400 1685 aa27.3■■□□□ 1.96
HDAC11-217ENST00000475818 CST9Q5W186 159 aa27.3■■□□□ 1.96
HDAC11-217ENST00000475818 SCNN1DP51172 638 aa27.29■■□□□ 1.96
HDAC11-217ENST00000475818 PSMD1Q99460 953 aa27.29■■□□□ 1.96
HDAC11-217ENST00000475818 MCOLN1Q9GZU1 580 aa27.29■■□□□ 1.96
HDAC11-217ENST00000475818 GTF2E1P29083 439 aaPredicted RBP27.28■■□□□ 1.96
HDAC11-217ENST00000475818 TLL2Q9Y6L7 1015 aa27.28■■□□□ 1.96
HDAC11-217ENST00000475818 SNED1Q8TER0 1413 aa27.27■■□□□ 1.96
HDAC11-217ENST00000475818 CEMIPQ8WUJ3 1361 aa27.27■■□□□ 1.96
HDAC11-217ENST00000475818 CC2D1BQ5T0F9 858 aaKnown RBP27.26■■□□□ 1.95
HDAC11-217ENST00000475818 LARGE2Q8N3Y3 721 aa27.25■■□□□ 1.95
HDAC11-217ENST00000475818 NBPF26B4DH59 902 aa27.24■■□□□ 1.95
HDAC11-217ENST00000475818 MAP2K2P36507 400 aa27.24■■□□□ 1.95
HDAC11-217ENST00000475818 HLFQ16534 295 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms