RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-208	ENST00000475716	FER1L6	Q2WGJ9	1857 aa		13.65	□□□□□ -0.22
SNX5-208	ENST00000475716	A1BG	P04217	495 aa		13.64	□□□□□ -0.23
SNX5-208	ENST00000475716	MAP2K1	Q02750	393 aa	Predicted RBP	13.64	□□□□□ -0.23
SNX5-208	ENST00000475716	ANKRD31	Q8N7Z5	1873 aa		13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	DICER1	Q9UPY3	1922 aa	Known RBP	13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	SLX4	Q8IY92	1834 aa		13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	CNBD1	Q8NA66	436 aa		13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	ZNF496	Q96IT1	587 aa	Predicted RBP	13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	TSKS	Q9UJT2	592 aa		13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	ABT1	Q9ULW3	272 aa	Known RBP	13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	SCN11A	Q9UI33	1791 aa		13.63	□□□□□ -0.23
SNX5-208	ENST00000475716	NPHP1	O15259	732 aa		13.62	□□□□□ -0.23
SNX5-208	ENST00000475716	CAMTA2	O94983	1202 aa		13.62	□□□□□ -0.23
SNX5-208	ENST00000475716	SOGA3	Q5TF21	947 aa		13.62	□□□□□ -0.23
SNX5-208	ENST00000475716	PCDH10	Q9P2E7	1040 aa		13.62	□□□□□ -0.23
SNX5-208	ENST00000475716	RNF123	Q5XPI4	1314 aa		13.62	□□□□□ -0.23
SNX5-208	ENST00000475716	ST5	P78524	1137 aa		13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	GRM1	Q13255	1194 aa		13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	CCDC93	Q567U6	631 aa		13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	TTC5	Q8N0Z6	440 aa		13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	VIRMA	Q69YN4	1812 aa	Known RBP	13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	COL11A2	P13942	1736 aa	Predicted RBP	13.61	□□□□□ -0.23
SNX5-208	ENST00000475716	IL6ST	P40189	918 aa	Predicted RBP	13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	PIP4K2A	P48426	406 aa	Predicted RBP	13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	CYP4F22	Q6NT55	531 aa		13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	PNMA8A	Q86V59	439 aa	Predicted RBP	13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	SYNE4	Q8N205	404 aa		13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	CAPNS2	Q96L46	248 aa		13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	GPR101	Q96P66	508 aa	Predicted RBP	13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SNX5-208	ENST00000475716	FZD9	O00144	591 aa		13.59	□□□□□ -0.23
SNX5-208	ENST00000475716	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.59	□□□□□ -0.23
SNX5-208	ENST00000475716	IL17RE	Q8NFR9	667 aa		13.59	□□□□□ -0.23
SNX5-208	ENST00000475716	KCNQ3	O43525	872 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	AOC2	O75106	756 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	NPR1	P16066	1061 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	CST9	Q5W186	159 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	ZNF790	Q6PG37	636 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	CFAP44	Q96MT7	982 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	MRC1	P22897	1456 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	HEG1	Q9ULI3	1381 aa		13.58	□□□□□ -0.24
SNX5-208	ENST00000475716	SCN4A	P35499	1836 aa		13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	KLRG2	A4D1S0	409 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	FAM177B	A6PVY3	158 aa		13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	TRAF5	O00463	557 aa		13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	IARS	P41252	1262 aa	Known RBP	13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	DZIP3	Q86Y13	1208 aa	Known RBP	13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	BEGAIN	Q9BUH8	593 aa		13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	GJA3	Q9Y6H8	435 aa		13.57	□□□□□ -0.24
SNX5-208	ENST00000475716	EPS15	P42566	896 aa		13.56	□□□□□ -0.24
SNX5-208	ENST00000475716	RTKN2	Q8IZC4	609 aa		13.56	□□□□□ -0.24
SNX5-208	ENST00000475716	GPC2	Q8N158	579 aa		13.56	□□□□□ -0.24
SNX5-208	ENST00000475716	MCOLN1	Q9GZU1	580 aa		13.56	□□□□□ -0.24
SNX5-208	ENST00000475716	USP16	Q9Y5T5	823 aa		13.56	□□□□□ -0.24
SNX5-208	ENST00000475716	ADAMTSL1	Q8N6G6	1762 aa		13.55	□□□□□ -0.24
SNX5-208	ENST00000475716	TNRC18	O15417	2968 aa	Predicted RBP	13.55	□□□□□ -0.24
SNX5-208	ENST00000475716	PRAMEF22	A3QJZ6	481 aa		13.55	□□□□□ -0.24
SNX5-208	ENST00000475716	NPM2	Q86SE8	214 aa	Known RBP	13.55	□□□□□ -0.24
SNX5-208	ENST00000475716	ECE1	P42892	770 aa		13.54	□□□□□ -0.24
SNX5-208	ENST00000475716	TEF	Q10587	303 aa		13.54	□□□□□ -0.24
SNX5-208	ENST00000475716	FMNL2	Q96PY5	1086 aa		13.54	□□□□□ -0.24
SNX5-208	ENST00000475716	CACNA1S	Q13698	1873 aa		13.53	□□□□□ -0.24
SNX5-208	ENST00000475716	TPTE2	Q6XPS3	522 aa		13.53	□□□□□ -0.24
SNX5-208	ENST00000475716	SLC51A	Q86UW1	340 aa		13.53	□□□□□ -0.24
SNX5-208	ENST00000475716	KNSTRN	Q9Y448	316 aa		13.53	□□□□□ -0.24
SNX5-208	ENST00000475716	TLL2	Q9Y6L7	1015 aa		13.53	□□□□□ -0.24
SNX5-208	ENST00000475716	DIAPH1	O60610	1272 aa	Known RBP	13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	HSPA5	P11021	654 aa	Known RBP	13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	ALDH1B1	P30837	517 aa		13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	SCNN1D	P51172	638 aa		13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	EIF6	P56537	245 aa	Known RBP	13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	CLEC4G	Q6UXB4	293 aa		13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	JDP2	Q8WYK2	163 aa		13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SNX5-208	ENST00000475716	GNAT3	A8MTJ3	354 aa		13.51	□□□□□ -0.25
SNX5-208	ENST00000475716	MAP2K2	P36507	400 aa		13.51	□□□□□ -0.25
SNX5-208	ENST00000475716	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.51	□□□□□ -0.25
SNX5-208	ENST00000475716	UBR2	Q8IWV8	1755 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	BTBD11	A6QL63	1104 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	LMOD1	P29536	600 aa	Predicted RBP	13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	DGKZ	Q13574	1117 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	HLF	Q16534	295 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	PSMD1	Q99460	953 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	COL4A5	P29400	1685 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	SCN7A	Q01118	1682 aa		13.5	□□□□□ -0.25
SNX5-208	ENST00000475716	NBPF26	B4DH59	902 aa		13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	TCERG1	O14776	1098 aa	Known RBP	13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	NBPF10	Q6P3W6	841 aa	Known RBP	13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	USP50	Q70EL3	339 aa	Predicted RBP	13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	SAPCD2	Q86UD0	394 aa		13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	NBPF15	Q8N660	670 aa		13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	ZIC5	Q96T25	663 aa		13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	LTBP1	Q14766	1721 aa		13.49	□□□□□ -0.25
SNX5-208	ENST00000475716	CELF2	O95319	508 aa	Known RBP	13.48	□□□□□ -0.25
SNX5-208	ENST00000475716	CIAPIN1	Q6FI81	312 aa		13.48	□□□□□ -0.25
SNX5-208	ENST00000475716	LARGE2	Q8N3Y3	721 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms