RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 KIF6Q6ZMV9 814 aa28.41■■■□□ 2.14
MCF2L2-209ENST00000475664 MRPL50Q8N5N7 158 aaKnown RBP28.41■■■□□ 2.14
MCF2L2-209ENST00000475664 ARXQ96QS3 562 aa28.41■■■□□ 2.14
MCF2L2-209ENST00000475664 MAP3K15Q6ZN16 1313 aa28.41■■■□□ 2.14
MCF2L2-209ENST00000475664 ARFGEF2Q9Y6D5 1785 aa28.4■■■□□ 2.14
MCF2L2-209ENST00000475664 GYS1P13807 737 aa28.4■■■□□ 2.14
MCF2L2-209ENST00000475664 BCL2L13Q9BXK5 485 aa28.4■■■□□ 2.14
MCF2L2-209ENST00000475664 BCL2L12Q9HB09 334 aa28.4■■■□□ 2.14
MCF2L2-209ENST00000475664 SMC4Q9NTJ3 1288 aa28.39■■■□□ 2.14
MCF2L2-209ENST00000475664 ERVV-1B6SEH8 477 aa28.38■■■□□ 2.13
MCF2L2-209ENST00000475664 RGL2O15211 777 aa28.38■■■□□ 2.13
MCF2L2-209ENST00000475664 FLIIQ13045 1269 aa28.38■■■□□ 2.13
MCF2L2-209ENST00000475664 ZBTB3Q9H5J0 574 aa28.37■■■□□ 2.13
MCF2L2-209ENST00000475664 ANKRD36CQ5JPF3 1778 aa28.37■■■□□ 2.13
MCF2L2-209ENST00000475664 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
MCF2L2-209ENST00000475664 FKBP8Q14318 412 aa28.35■■■□□ 2.13
MCF2L2-209ENST00000475664 HLFQ16534 295 aa28.35■■■□□ 2.13
MCF2L2-209ENST00000475664 ANKRD13DQ6ZTN6 518 aa28.35■■■□□ 2.13
MCF2L2-209ENST00000475664 PLBD2Q8NHP8 589 aa28.35■■■□□ 2.13
MCF2L2-209ENST00000475664 MTFR1LQ9H019 292 aa28.35■■■□□ 2.13
MCF2L2-209ENST00000475664 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
MCF2L2-209ENST00000475664 CLEC4GQ6UXB4 293 aa28.34■■■□□ 2.13
MCF2L2-209ENST00000475664 DDX58O95786 925 aaKnown RBP28.33■■■□□ 2.13
MCF2L2-209ENST00000475664 MSL1Q68DK7 614 aa28.33■■■□□ 2.13
MCF2L2-209ENST00000475664 NLGN1Q8N2Q7 840 aa28.33■■■□□ 2.13
MCF2L2-209ENST00000475664 ZNF652Q9Y2D9 606 aa28.33■■■□□ 2.13
MCF2L2-209ENST00000475664 ADCY9O60503 1353 aa28.33■■■□□ 2.13
MCF2L2-209ENST00000475664 BCAR3O75815 825 aa28.32■■■□□ 2.12
MCF2L2-209ENST00000475664 FKBP5Q13451 457 aaPredicted RBP28.32■■■□□ 2.12
MCF2L2-209ENST00000475664 GIGYF2Q6Y7W6 1299 aaKnown RBP28.32■■■□□ 2.12
MCF2L2-209ENST00000475664 ATP10DQ9P241 1426 aa28.32■■■□□ 2.12
MCF2L2-209ENST00000475664 KSR2Q6VAB6 950 aa28.31■■■□□ 2.12
MCF2L2-209ENST00000475664 RCAN3Q9UKA8 241 aa28.31■■■□□ 2.12
MCF2L2-209ENST00000475664 PTPRCP08575 1304 aa28.3■■■□□ 2.12
MCF2L2-209ENST00000475664 PI4KAP2A4QPH2 592 aa28.3■■■□□ 2.12
MCF2L2-209ENST00000475664 RIC3Q7Z5B4 369 aa28.3■■■□□ 2.12
MCF2L2-209ENST00000475664 PI4KAP1Q8N8J0 262 aa28.3■■■□□ 2.12
MCF2L2-209ENST00000475664 KIF16BQ96L93 1317 aa28.29■■■□□ 2.12
MCF2L2-209ENST00000475664 TBC1D9BQ66K14 1250 aa28.29■■■□□ 2.12
MCF2L2-209ENST00000475664 NFIXQ14938 502 aa28.28■■■□□ 2.12
MCF2L2-209ENST00000475664 ATF5Q9Y2D1 282 aaPredicted RBP28.28■■■□□ 2.12
MCF2L2-209ENST00000475664 MAP3K2Q9Y2U5 619 aa28.28■■■□□ 2.12
MCF2L2-209ENST00000475664 TM4SF1P30408 202 aa28.27■■■□□ 2.12
MCF2L2-209ENST00000475664 HSP90AB3PQ58FF7 597 aa28.27■■■□□ 2.12
MCF2L2-209ENST00000475664 NOB1Q9ULX3 412 aaKnown RBP28.27■■■□□ 2.12
MCF2L2-209ENST00000475664 TCIRG1Q13488 830 aa28.26■■■□□ 2.11
MCF2L2-209ENST00000475664 AFDNP55196 1824 aaKnown RBP28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 MMP10P09238 476 aa28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 DDR1Q08345 913 aa28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 ZNF34Q8IZ26 560 aa28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 SGIP1Q9BQI5 828 aa28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
MCF2L2-209ENST00000475664 NRXN2Q9P2S2 1712 aa28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 F6X3S4 739 aa28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 PTGER2P43116 358 aa28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 BICDL1Q6ZP65 573 aa28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 DNAAF4Q8WXU2 420 aa28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 NIP7Q9Y221 180 aaKnown RBP eCLIP28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
MCF2L2-209ENST00000475664 UBN2Q6ZU65 1347 aa28.23■■■□□ 2.11
MCF2L2-209ENST00000475664 ISCA1Q9BUE6 129 aa28.23■■■□□ 2.11
MCF2L2-209ENST00000475664 SPON1Q9HCB6 807 aa28.23■■■□□ 2.11
MCF2L2-209ENST00000475664 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
MCF2L2-209ENST00000475664 POLRMTO00411 1230 aaKnown RBP28.22■■■□□ 2.11
MCF2L2-209ENST00000475664 GPTP24298 496 aa28.22■■■□□ 2.11
MCF2L2-209ENST00000475664 ARHGAP45Q92619 1136 aa28.22■■■□□ 2.11
MCF2L2-209ENST00000475664 SETDB2Q96T68 719 aa28.22■■■□□ 2.11
MCF2L2-209ENST00000475664 MYD88Q99836 296 aa28.22■■■□□ 2.11
MCF2L2-209ENST00000475664 PXDNLA1KZ92 1463 aa28.21■■■□□ 2.11
MCF2L2-209ENST00000475664 IPO8O15397 1037 aaKnown RBP28.2■■■□□ 2.1
MCF2L2-209ENST00000475664 POLD1P28340 1107 aa28.2■■■□□ 2.1
MCF2L2-209ENST00000475664 FRAT1Q92837 279 aaPredicted RBP28.2■■■□□ 2.1
MCF2L2-209ENST00000475664 API5Q9BZZ5 524 aaKnown RBP28.2■■■□□ 2.1
MCF2L2-209ENST00000475664 LRP5O75197 1615 aa28.19■■■□□ 2.1
MCF2L2-209ENST00000475664 ATP5J2-PTCD1G3V325 749 aa28.19■■■□□ 2.1
MCF2L2-209ENST00000475664 TRIM28Q13263 835 aaKnown RBP28.19■■■□□ 2.1
MCF2L2-209ENST00000475664 NLRP10Q86W26 655 aa28.19■■■□□ 2.1
MCF2L2-209ENST00000475664 PARP3Q9Y6F1 533 aa28.19■■■□□ 2.1
MCF2L2-209ENST00000475664 IGKV5-2P06315 115 aa28.18■■■□□ 2.1
MCF2L2-209ENST00000475664 NEXNQ0ZGT2 675 aa28.18■■■□□ 2.1
MCF2L2-209ENST00000475664 PARP10Q53GL7 1025 aa28.18■■■□□ 2.1
MCF2L2-209ENST00000475664 ATF7IPQ6VMQ6 1270 aa28.18■■■□□ 2.1
MCF2L2-209ENST00000475664 IBTKQ9P2D0 1353 aaPredicted RBP28.18■■■□□ 2.1
MCF2L2-209ENST00000475664 SERPINB2P05120 415 aa28.17■■■□□ 2.1
MCF2L2-209ENST00000475664 TRIM27P14373 513 aa28.17■■■□□ 2.1
MCF2L2-209ENST00000475664 ZKSCAN2Q63HK3 967 aa28.17■■■□□ 2.1
MCF2L2-209ENST00000475664 BEND3Q5T5X7 828 aa28.16■■■□□ 2.1
MCF2L2-209ENST00000475664 SUSD4Q5VX71 490 aa28.16■■■□□ 2.1
MCF2L2-209ENST00000475664 LINS1Q8NG48 757 aa28.16■■■□□ 2.1
MCF2L2-209ENST00000475664 CWF19L2Q2TBE0 894 aaKnown RBP28.15■■■□□ 2.1
MCF2L2-209ENST00000475664 SLC4A10Q6U841 1118 aa28.15■■■□□ 2.1
MCF2L2-209ENST00000475664 TNNQ9UQP3 1299 aa28.15■■■□□ 2.1
MCF2L2-209ENST00000475664 ABCC4O15439 1325 aa28.15■■■□□ 2.1
MCF2L2-209ENST00000475664 NEURL1BA8MQ27 555 aa28.14■■■□□ 2.1
MCF2L2-209ENST00000475664 NBPF5PQ86XG9 351 aaPredicted RBP28.14■■■□□ 2.1
MCF2L2-209ENST00000475664 CCDC191Q8NCU4 936 aa28.14■■■□□ 2.1
MCF2L2-209ENST00000475664 NTSR2O95665 410 aa28.13■■■□□ 2.09
MCF2L2-209ENST00000475664 KIF13BQ9NQT8 1826 aa28.13■■■□□ 2.09
MCF2L2-209ENST00000475664 FAM177BA6PVY3 158 aa28.12■■■□□ 2.09
MCF2L2-209ENST00000475664 PRR5LQ6MZQ0 368 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms